Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1922 ATGAGTTTTCTCTGGAGATTTTTCTCACTTGTTTTTCTTGTTATTATTGTTACTGTAAATCAATGTTTTGGGTTAAACAGAGATGGTAATCTGTTGCTTTCTTTGAAGTCCTCTGTTTCTAATGATCCTCTGTCCGCATTTGGAAACTGGAATTACTTGGACGAGACACCTTGTTCGTGGAAAGGAGTTTCATGTCAAGTTGTTTCAGATGCAACGAATATTTCTACTTTTTCTCAGGATCGAGTGGTTGGTTTGTCTCTTCCGAATTCTCAGCTTCTGGGTTTCATTCCTAACGATCTTGGTTTCATAGAAAATCTTCAAAGTCTCGACCTTTCTAATAATTCTCTCAATGGGTCTCTTCCTTCTTCTCTGTTCCAGGCTTCAAAGCTTGGGTTTCTTGACTTGTCTAACAATTTGATCTCGGGTGAGATTCCGGATTCCATAGTACAGCTTACTGATCTTCAGGTTCTAAACCTCTCTGACAATGCATTGGCGGGAAATATTCCCGACAGTCTCGGAAGGATGCAGAATCTAAGTGTTGCGTCGGCGAAGAATAATTACTTCTCAGGTGGTCTTCCTAGTGGGTTTCGAACGACACAAGTTTTAGATCTATCTTCCAACTTGCTGAACGGATCTCTTCCTTCAGATTTTGGTGGGCGAAGTTTGAGATACTTGAACGTTTCTTTCAACAAAATTTCCGGAAAAATCCCCGCCGAATTCGCCGGGAAAATCCCGAGCAACGCTACCGTTGATCTCTCCTTCAACAACCTTACCGGAGAGATTCCCCGTTCTTCTGTTTTCATGAACTCCGATTCGAGTTCACTTTCTGGTAATCCCGATCTCTGCGGAGAAAAAATACATAACCCATGTTCCGTTTCATCGCCACCATCTCCTTCACCAAATGACACTCCTCCGACGTCTCCTCCGGCATTCGCTGCATTTCCAAAGACAATTAATTCTCCCCCGTCGGAATCAGGACACGGCACTTCGAAACAGAACAAATCAGGGCTCAGAAGAGGAACACTCATAGGAATCGTAATTGGGGACATAATAGGAATTGGATCAGTAGCCATAATTTTCCTATACGTGTACCGATCAAAAAGAAGGAAGAATGCAGAGGAAGCCCTAAACAAAGAACCTATCCATGTGTCGTCGTCATCACCGTCGTCCTCGGAGTCAAGAGGGATCAGAAGGTGGTCATGTCTGCGTAAGAAAACAGAGGAGGAGGAAGAATATTCATCAGAATCAACGAGCTCTTCTGATAGCGAAGTGGAAGTACAAAATGGGGTTCAGAGACAAGAAGAATCTTCGCAGAACAAAACAGGGAGATTGGTGATGGTTGATGGTGAGAAAGAGATGGAGCTTGAGACACTTCTAAAGGCATCAGCTTTCACACTGGGAGCTACAGGTTCAAGCATAATGTACAAGGCGGTTCTCGAAGACGGCACGATGTTGGCGGTTCGGAGGATCGGCGAGAGCGGTTTAGGCCGGTTCAAGGATTTCGAGACCCAGGTCCGAGTCGTAGCCAAACTGGTTCATCCAAACCTGGTTCGGGTTCGAGGGTTCTGTTGGGGAAAACAAGAAAAGCTTATCATCTACGACTACGTGCCGAATGGCAGCCTCGCCAATGTTCGTTACAGGAAAGTGGGTTCCTCGCCTTCCCATGTGCCATGGGAAATAAGGCTGAAGATTGCAAGAGGAGTGGCACGTGGCCTGGCTTACCTCCACGACAAGAAGCACGTGCATGCAAATCTGAAGCCCAGCAACATTCTCTTGGGCAATGACATGGAGCCCAAGATCGGAGACTTGGGGCTTGAGAAAATTGTGACAGGTGATGCCGGTTATAAGCCCGGTGGGTCGGCCCGTATCTTTGGCAGCAAGAGATCCTCAGCCTCACGGGATAGCCTCCACGATGTTAACTCTGGGCCAAGCCCAAGCCCAAGCCCGAGTTCTATGACTGGTGTCTCTCCTTACCATGCACCTGAGTCATTCAGAAACCTGAAGGCTCACCCAAAGTGGGACGTCTACTCGTTTGGGATCATATTTTTGGAGCTGCTAACAGGGAAGATTGTGGTTACAGATGAGATGGGCCAAGGCCCGGCCCTGCCGGTGGAGGATAAGAACAGGACCTTGAGGATGGCTGACATGGCAATCCGTGCTGACATGGAGGGTAAAGAAGAGGCCTTGTTGGCTTACTTCAGATTAGGGTATAGTTGTGTGTCTGGTGTCCCACAGAAAAGGCCATCAATGAAGGAAGTGTTGTCTGCTCTTGATAAAATCACAAGCTCCTGTTCTTCTTCTCCCTCAAGCTCTTATTATTATGGTCACTAA 2331 0.4668 MSFLWRFFSLVFLVIIVTVNQCFGLNRDGNLLLSLKSSVSNDPLSAFGNWNYLDETPCSWKGVSCQVVSDATNISTFSQDRVVGLSLPNSQLLGFIPNDLGFIENLQSLDLSNNSLNGSLPSSLFQASKLGFLDLSNNLISGEIPDSIVQLTDLQVLNLSDNALAGNIPDSLGRMQNLSVASAKNNYFSGGLPSGFRTTQVLDLSSNLLNGSLPSDFGGRSLRYLNVSFNKISGKIPAEFAGKIPSNATVDLSFNNLTGEIPRSSVFMNSDSSSLSGNPDLCGEKIHNPCSVSSPPSPSPNDTPPTSPPAFAAFPKTINSPPSESGHGTSKQNKSGLRRGTLIGIVIGDIIGIGSVAIIFLYVYRSKRRKNAEEALNKEPIHVSSSSPSSSESRGIRRWSCLRKKTEEEEEYSSESTSSSDSEVEVQNGVQRQEESSQNKTGRLVMVDGEKEMELETLLKASAFTLGATGSSIMYKAVLEDGTMLAVRRIGESGLGRFKDFETQVRVVAKLVHPNLVRVRGFCWGKQEKLIIYDYVPNGSLANVRYRKVGSSPSHVPWEIRLKIARGVARGLAYLHDKKHVHANLKPSNILLGNDMEPKIGDLGLEKIVTGDAGYKPGGSARIFGSKRSSASRDSLHDVNSGPSPSPSPSSMTGVSPYHAPESFRNLKAHPKWDVYSFGIIFLELLTGKIVVTDEMGQGPALPVEDKNRTLRMADMAIRADMEGKEEALLAYFRLGYSCVSGVPQKRPSMKEVLSALDKITSSCSSSPSSSYYYGH 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1922 776 FunFam Leucine-rich repeat receptor-like protein kinase 25 194 - -
Acco12g1922 776 Gene3D Transferase(Phosphotransferase) domain 1 536 771 - -
Acco12g1922 776 ProSiteProfiles Protein kinase domain profile. 460 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1922 776 MobiDBLite consensus disorder prediction 625 657 - -
Acco12g1922 776 MobiDBLite consensus disorder prediction 380 396 - -
Acco12g1922 776 FunFam Leucine-rich repeat receptor-like protein kinase 198 292 - -
Acco12g1922 776 MobiDBLite consensus disorder prediction 286 335 - -
Acco12g1922 776 MobiDBLite consensus disorder prediction 404 445 - -
Acco12g1922 776 Gene3D Phosphorylase Kinase; domain 1 424 535 - -
Acco12g1922 776 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Acco12g1922 776 Pfam Leucine rich repeat 105 164 IPR001611 GO:0005515
Acco12g1922 776 MobiDBLite consensus disorder prediction 293 311 - -
Acco12g1922 776 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 85 759 - -
Acco12g1922 776 Gene3D Ribonuclease Inhibitor 25 197 IPR032675 -
Acco12g1922 776 SUPERFAMILY L domain-like 26 283 - -
Acco12g1922 776 SMART LRR_typ_2 103 127 IPR003591 -
Acco12g1922 776 SMART LRR_typ_2 151 175 IPR003591 -
Acco12g1922 776 Gene3D Ribonuclease Inhibitor 198 292 IPR032675 -
Acco12g1922 776 MobiDBLite consensus disorder prediction 417 443 - -
Acco12g1922 776 PRINTS Leucine-rich repeat signature 106 119 - -
Acco12g1922 776 PRINTS Leucine-rich repeat signature 151 164 - -
Acco12g1922 776 MobiDBLite consensus disorder prediction 318 335 - -
Acco12g1922 776 Pfam Protein kinase domain 466 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1922 776 ProSiteProfiles Leucine-rich repeat profile. 105 127 IPR001611 GO:0005515
Acco12g1922 776 SUPERFAMILY Protein kinase-like (PK-like) 466 757 IPR011009 -
Acco12g1922 776 MobiDBLite consensus disorder prediction 378 397 - -
Acco12g1922 776 MobiDBLite consensus disorder prediction 624 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1922 Acco-ChrAcco12 30714373 30717877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1922 11 776 Receptor kinase-like Gene Family AT4G37250 56.777 0.0 811
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Acco12g1922 Pkinase 7.4e-30 CL0016