Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco12g1921 | ATGAATATGATCATTGATAGCAGGAAGGATGTGGATCGGATCAAGGGTCCATGGAGTCCCGAAGAGGATGACGCTTTACAGAAGCTGGTAGAAAAGCATGGAGCGAGGAACTGGTCTCTAATTAGCAAGTCCATTCCGGGTCGGTCCGGCAAGTCTTGTCGGCTACGATGGTGTAATCAACTTTCTCCTCAGGTGGAGCACCGACCTTTCTCGCCTGAAGAGGATGAGACTATTATTCGGGCTCATGCCCGATTCGGCAACAAATGGGCAACGATATCCCGGCTTCTGTCGGGTCGGACCGATAACGCCATCAAGAACCACTGGAATTCCACCTTGAAGCGCAAGTGTGCGTCCATGATGATGGATGAAATCACCGCCACTGGCGCCGGTGGTGGAGGATTCGACGGCAGTTTCAGCCCCCAGCCACTGAAGAGATCGGTGAGTGCTGGAGCTGCTATGCCTGTTTCGACAGGTTTTTACGGAAACCAGCAGACTCCGAGTAGCCCGTCCGGATCCGATGTTAGCGATTCCAGCGTGCCTGTAGCTTCTTCTTCCCATGTTTACCGGCCGGTGGCGAGAACAGGCGGAGTTCTACCTCCCGTAGAAACGACGTCGTCTTCTAATGAACCTACTACCTCGTTATCCCTATCACCTCCTGGTGTAGACTCTTTCGAAGTCTCAAATCGTGCTTCAGAGTCAGCACATGCTATTCCGTTAGCGAACACTGTTCGTTTGTTACCGGCAATGGTTTCAGCCGTGGCCTCCTCCGCAGCTCCACCGCTACCTCCGGTGTCGGCGCAGCAGCAGGTTCATATAGGCCTAGGTGATAGGAGGAGCGGTGATGGCGTGTCACCGGCTGCGAACACAAACAGGGAAGCTCCGTTCAATTTCAGTGCAGAGTTGTTAGCTGTGATGCAGGAGATGATAAAAACAGAGGTGAGGAGTTATATGGCGGGACTAGAAAAGAGGCGGCTCATGGATTTGCGAACGCTTCAGTGA | 999 | 0.5305 | MNMIIDSRKDVDRIKGPWSPEEDDALQKLVEKHGARNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRPFSPEEDETIIRAHARFGNKWATISRLLSGRTDNAIKNHWNSTLKRKCASMMMDEITATGAGGGGFDGSFSPQPLKRSVSAGAAMPVSTGFYGNQQTPSSPSGSDVSDSSVPVASSSHVYRPVARTGGVLPPVETTSSSNEPTTSLSLSPPGVDSFEVSNRASESAHAIPLANTVRLLPAMVSAVASSAAPPLPPVSAQQQVHIGLGDRRSGDGVSPAANTNREAPFNFSAELLAVMQEMIKTEVRSYMAGLEKRRLMDLRTLQ | 332 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco12g1921 | 332 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 10 | 65 | IPR017930 | - | |
| Acco12g1921 | 332 | CDD | SANT | 69 | 112 | IPR001005 | - | |
| Acco12g1921 | 332 | ProSiteProfiles | Myb-like domain profile. | 10 | 61 | IPR001005 | - | |
| Acco12g1921 | 332 | MobiDBLite | consensus disorder prediction | 158 | 184 | - | - | |
| Acco12g1921 | 332 | PANTHER | MYB PROTEIN-RELATED | 15 | 200 | - | - | |
| Acco12g1921 | 332 | Pfam | Myb-like DNA-binding domain | 18 | 76 | - | - | |
| Acco12g1921 | 332 | FunFam | Transcription factor MYB44 | 69 | 115 | - | - | |
| Acco12g1921 | 332 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 67 | 116 | IPR017930 | - | |
| Acco12g1921 | 332 | SUPERFAMILY | Homeodomain-like | 12 | 108 | IPR009057 | - | |
| Acco12g1921 | 332 | SMART | sant | 66 | 114 | IPR001005 | - | |
| Acco12g1921 | 332 | SMART | sant | 14 | 63 | IPR001005 | - | |
| Acco12g1921 | 332 | ProSiteProfiles | Myb-like domain profile. | 62 | 112 | IPR001005 | - | |
| Acco12g1921 | 332 | MobiDBLite | consensus disorder prediction | 158 | 220 | - | - | |
| Acco12g1921 | 332 | CDD | SANT | 17 | 59 | IPR001005 | - | |
| Acco12g1921 | 332 | Gene3D | - | 68 | 127 | - | - | |
| Acco12g1921 | 332 | FunFam | MYB transcription factor | 15 | 66 | - | - | |
| Acco12g1921 | 332 | MobiDBLite | consensus disorder prediction | 199 | 220 | - | - | |
| Acco12g1921 | 332 | Gene3D | - | 14 | 66 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Acco12g1921 | Acco-ChrAcco12 | 30673564 | 30674562 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Acco12g1921 | 7 | 322 | MYB Transcription Factor Family | AT4G37260 | 52.050 | 8.10e-97 | 288 |
Transcription factors information