Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1914 ATGAAACCTCGTATCATCTCCATGTTTTCTTTCCTTCTTCTTCTTCTTCAATTCGCCTCCTCCATGGCTTCAGCCTACACTTTTCCCGATAAGTATTTCATCAATTGCGGGTCCAATCTCAGTGTAAAAGACGACGGCGGCGGTCCGGTTTTCGTTGGTGACGAGTCTGCTCCTGCTTCCGTCTGCTTTCCGAAGCAGAGCTCCATCGTGAAGGAACGTAATAATTCGTCAACCACACCTCCCCTGTATCAAACCGCGAGAATCTTTCAGGTTCGATCTGCTTACAAGTTCACAATCGGCGAAAATGAAAGCGGATATTATCTGGTACGTCTCCATTTCTATGCTTTTCCGACTGGAGAATCACTATCTAGTGCTCGATTCAACGTTTCCAGTGCCGGATTCTTGTTGTTGGAAGATTTCAGCGCTGAAAATAAAACAAACTCTCTTTTTGTAAAGGAGTTTTCTCTCAACATCGATAGCAAAACGGACCTGCAAATCGATTTTTTCCCAGTGAAATCAAAATTCGCATTTGTAAACGCCATAGAACTGTTTCGAATCCCTGATAACTTTATCCCCAATATGGCATCACATGTTACTAGCAAAGGAAATGTCAGTGATTACAAGAGCATTCACTCCTCGGTGTTAAGTACGACGTACAGGCTCGATGTTGGTCATTCTGGGAGTTCCATGGAAACGGACGATACCTTGCGGAGAAGATGGGAAAAAGATGGTCAATACGCTAAAAATGGAATAGCGATTTCTAGCTCTGTTGCTATTAATTACGACGTCCCAGGAGAAGATAATAATAATGGTTCGGAAGAAAATGATGGTGTGGCTTCCAATATTGTTACAGCCCCAAAAATTGTTTACCAGACAGCCAGAGCGATGAGTTCAGATTCAGGCAATGTTGATAAATTTTTTAACATATCATGGTCACTTCCGGTGAAGAGGAATTATAGTTATTTCATTCGAGCTCACTTTTGTGACCTTACCAGTATGGGCGTTGGTCTTACATACTTCAATTTTTATATCTACGACCACTTCAATTGGTCGGTCCCTACAAATTTGTTGGGGTCTTCTGTTCCTATTTATCGGGATTTCGTTGTGGATTCTGATGACTCTGGGAATTTGACGATAATTGTTGGCCCTGATAAATCATCTCCTGTTAAAAATGCTTTCTTGAATGGTCTTGAAGTGATGGAAATCATTAAAACTCGAGGTCAACCTGCAATAGCAGCCAATTACCATTGTAAGAAGGAAAATCACATTCATCTTGTTCTAGAGTTGGTGCTTGGATCATTTGCACTGATTTGCATTATGGTGGTTGTGTTCTGTTTGATCTGGAAATATAGAAAATCAAAGATTATTGGAAATCTGGATTGGGCCCCACTTTCTGTTAAAGGAGGAGGAAGTTCACATGGCAAAAGAGGAAGCAGCCATGGCTCATCTCTTGGCAACTTAAAACTTGGACTGAAGATGTCTTTTAACGAGATTCAATCTGCAACAAACAATTTCCACAAAAAACGGATTATTGGCAAGGGTGGATTTGGAAATGTGTACAAGGGAATTCTCAAGAATGGTGTAAAAATAGCAGTGAAGAGAAGTGAACCAGGTTCAGGACAAGGATTCCCAGAATTCCAGACAGAGATCATGGTCTTGTCGCGAATTCGCCACCGTCATCTTGTTTCCTTAATCGGGTACTGCGACGAGAGGTCAGAGATGATTCTGGTTTACGAGTACATGGAAAAGGGCACACTCAGAGATCACCTGTACCACTCGAATCTACCGAGCTTAAGCTGGAAAGAGAGGCTCGAAATCTGCATCGGAGCAGCACGAGGTCTGAACTATCTTCACAAAGGAGCAGCCGGCGGAATCATCCACCGTGACGTGAAGTCAACAAACATATTGCTCGACGAAAACCATGTTGCTAAGGTTGCCGACTTTGGCCTGTCAAAAACAGGTCCTCTTGATCATCAACAACCATCAGTGACCACAGGTGTTAAGGGCACTTTTGGGTATCTTGATCCTGAATATTTCAGAACACAACAATTAACAGAAAAATCTGATGTTTACTCATTTGGGGTGGTTCTTCTTGAAGTGTTATGTGCAAGACCAGCCCTTGATCCTACGCTTCCATGGAACCAGGTGAACTTAGCTGAGTGGGGAATGTTCTGCAAACGAAGAGGGACATTAGAACAACTGATAGATCCGAGGATAAAGGACCAGATTGATCCGAACTCGCTGAGGAAGTTCAATGAGACAGTGGAGAAATGTCTGGAAGAAGAAGGGAGTGAGAGACCAACGATGAGTGATGTTTTGTGGGATTTGGAATATTCACTGCAACTTCAGAGAGGAGCGAGAAAGAGGAACTTATCAGGAGAGGATAGTAATAATACAGGAACAGGAGCATCGATTGAACTGTCCAACGTAAGACGTCTTCCTTCACTGTCGACACAAGTTGATTCAGAAGTGATGTCTATTTTGAACGATGATAGTGCAGCACACTCGGTTTTCTCCATGTCCAATTTTCCTCACGGTACCAGATAA 2547 0.4268 MKPRIISMFSFLLLLLQFASSMASAYTFPDKYFINCGSNLSVKDDGGGPVFVGDESAPASVCFPKQSSIVKERNNSSTTPPLYQTARIFQVRSAYKFTIGENESGYYLVRLHFYAFPTGESLSSARFNVSSAGFLLLEDFSAENKTNSLFVKEFSLNIDSKTDLQIDFFPVKSKFAFVNAIELFRIPDNFIPNMASHVTSKGNVSDYKSIHSSVLSTTYRLDVGHSGSSMETDDTLRRRWEKDGQYAKNGIAISSSVAINYDVPGEDNNNGSEENDGVASNIVTAPKIVYQTARAMSSDSGNVDKFFNISWSLPVKRNYSYFIRAHFCDLTSMGVGLTYFNFYIYDHFNWSVPTNLLGSSVPIYRDFVVDSDDSGNLTIIVGPDKSSPVKNAFLNGLEVMEIIKTRGQPAIAANYHCKKENHIHLVLELVLGSFALICIMVVVFCLIWKYRKSKIIGNLDWAPLSVKGGGSSHGKRGSSHGSSLGNLKLGLKMSFNEIQSATNNFHKKRIIGKGGFGNVYKGILKNGVKIAVKRSEPGSGQGFPEFQTEIMVLSRIRHRHLVSLIGYCDERSEMILVYEYMEKGTLRDHLYHSNLPSLSWKERLEICIGAARGLNYLHKGAAGGIIHRDVKSTNILLDENHVAKVADFGLSKTGPLDHQQPSVTTGVKGTFGYLDPEYFRTQQLTEKSDVYSFGVVLLEVLCARPALDPTLPWNQVNLAEWGMFCKRRGTLEQLIDPRIKDQIDPNSLRKFNETVEKCLEEEGSERPTMSDVLWDLEYSLQLQRGARKRNLSGEDSNNTGTGASIELSNVRRLPSLSTQVDSEVMSILNDDSAAHSVFSMSNFPHGTR 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1914 848 CDD STKc_IRAK 511 777 - -
Acco12g1914 848 ProSiteProfiles Protein kinase domain profile. 505 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1914 848 SUPERFAMILY Protein kinase-like (PK-like) 492 774 IPR011009 -
Acco12g1914 848 Gene3D - 215 403 - -
Acco12g1914 848 Gene3D - 31 186 - -
Acco12g1914 848 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Acco12g1914 848 FunFam Receptor-like protein kinase FERONIA 581 798 - -
Acco12g1914 848 Gene3D Transferase(Phosphotransferase) domain 1 581 798 - -
Acco12g1914 848 SMART serkin_6 505 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1914 848 Gene3D Phosphorylase Kinase; domain 1 474 580 - -
Acco12g1914 848 Pfam Malectin-like domain 34 401 IPR024788 -
Acco12g1914 848 FunFam receptor-like protein kinase FERONIA 471 580 - -
Acco12g1914 848 ProSitePatterns Protein kinases ATP-binding region signature. 511 533 IPR017441 GO:0005524
Acco12g1914 848 Pfam Protein tyrosine and serine/threonine kinase 506 773 IPR001245 GO:0004672|GO:0006468
Acco12g1914 848 PANTHER OS07G0166700 PROTEIN 492 783 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1914 Acco-ChrAcco12 30593004 30595550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1914 12 805 Receptor kinase-like Gene Family AT2G23200 46.503 0.0 626
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Acco12g1914 Malectin_like 2.2e-33 CL0202