Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1906 ATGTCTAACCAGGACCAACCACTCCTTCGTGGCACCCGCGAGGAGGAGGAGGCGCCGGAAACCGCCTACGATTCGTCGGAGAAGATCGTGGTCGTCGGGGTTGATGACGCCGTCGCTGATTCTGATAATTTCGGTCAGGCGCCGCCGTTCTCATGGAGGAAGCTCTGGCTCTTCACAGGCCCTGGCTTTCTTATGAGCATCGCGTTTCTAGATCCTGGGAATTTGGAGGGTGATCTTCAGGCTGGTGCTATTGCTGGCTACTCACTTCTATGGCTCCTCATGTGGGCGACGGCCATGGGGCTTCTCGTTCAGCTTTTGTCTGCTCGGCTCGGCGTCGCCACCGGAAGGCACTTGGCTGAGCTCTGCAGAGAGGAGTACCCCACGTGGGCCAGATTGGTGCTCTGGTTTATGGCGGAGCTGGCTTTAATTGGGGCTGACATTCAAGAGGTTATTGGAAGCGCGATTGCTATTAGGATTCTAAGTAACGGATTTGTGCCTCTTTGGGCTGGGGTCGTCATCACTGCTTTTGACTGCTTTATCTTTCTTTTTCTGGAGAACTATGGTGTGAGGAAATTGGAAGCACTTTTTGCGGTTCTCATTGGTGTAATGGCGCTTTCATTTGCGTGGATGTTTGGCGAAGCAAAGCCCGATGGTTTAGATATTCTTCTAGGTCTTTTGGTTCCAAAACTTAGTTCCAGAACAATACAGCAGGCTGTTGCAGTTGTAGGCTGCATTATCATGCCCCACAACGTGTTCTTGCACTCTGCTCTTGTTCAATCGAGACAGATTGACACACGCAAGAAAGGGCGAGTTCAGGAAGCTCTTAATTATTATACTATCGAATCCGCTGTTGCTCTTGCCGTCTCCTTGGTCATTAACATATTTGTCACAACTGTGTTTGCCAAGGGTTTCTATGGTACTGAACTAGCAAATTCCATTGGTCTTGAAAATGCAGGGCAGTATCTTCAGCAGAAGTATGGTGGCGGACTTTTTCCGATCTTATATATATGGGGTATTGGGTTACTAGCAGCTGGGCAAAGCAGCACCATTACTGGCACTTATGCCGGACAATTTATTATGGGGGGTTTTCTGAATCTAAGGTTAAAAAAATGGGTGAGAGCTTTAATTACACGAAGTTGTGCTATCATCCCAACCATAATCGTTGCTCTTGTCTTTGATACCTCTGAGGATTCATTAGATGTCCTAAACGAATGGCTCAATATTCTTCAGTCAGTTCAAATACCTTTTGCCCTTATTCCCTTGCTTTGCTTGGTGTCCAAGGAGCAGTTGATGGGGACTTTCCGGATTGGCATTGTCCTCAAGATTATTTCCTGGTTTGTGGCTGCTTTAGTGATGGTCATTAACGGCTATCTGTTGGTGGAATTCTTCTCCTCTGAAGTGAACGGACCAGTGGTTGGCACCATAATAGTGTCTGTATTTACAGTCATGTATGTTGTGTTCATAATCTACCTCGCTTTACGAATGATCACCTTCTCGCCGTGGCAGAGATTTTCGCAAACCAAGGCAAACACTAACACAGAATTGACGAATTGA 1554 0.4723 MSNQDQPLLRGTREEEEAPETAYDSSEKIVVVGVDDAVADSDNFGQAPPFSWRKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATAMGLLVQLLSARLGVATGRHLAELCREEYPTWARLVLWFMAELALIGADIQEVIGSAIAIRILSNGFVPLWAGVVITAFDCFIFLFLENYGVRKLEALFAVLIGVMALSFAWMFGEAKPDGLDILLGLLVPKLSSRTIQQAVAVVGCIIMPHNVFLHSALVQSRQIDTRKKGRVQEALNYYTIESAVALAVSLVINIFVTTVFAKGFYGTELANSIGLENAGQYLQQKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWVRALITRSCAIIPTIIVALVFDTSEDSLDVLNEWLNILQSVQIPFALIPLLCLVSKEQLMGTFRIGIVLKIISWFVAALVMVINGYLLVEFFSSEVNGPVVGTIIVSVFTVMYVVFIIYLALRMITFSPWQRFSQTKANTNTELTN 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1906 517 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 53 431 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco12g1906 517 MobiDBLite consensus disorder prediction 9 23 - -
Acco12g1906 517 PRINTS Natural resistance-associated macrophage protein signature 164 183 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco12g1906 517 PRINTS Natural resistance-associated macrophage protein signature 134 160 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco12g1906 517 PRINTS Natural resistance-associated macrophage protein signature 373 390 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco12g1906 517 PRINTS Natural resistance-associated macrophage protein signature 238 261 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco12g1906 517 PRINTS Natural resistance-associated macrophage protein signature 189 210 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco12g1906 517 PRINTS Natural resistance-associated macrophage protein signature 345 364 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco12g1906 517 PRINTS Natural resistance-associated macrophage protein signature 407 426 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco12g1906 517 Pfam Natural resistance-associated macrophage protein 76 437 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco12g1906 517 Hamap Divalent metal cation transporter MntH [mntH]. 41 463 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco12g1906 517 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 46 498 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco12g1906 517 NCBIfam Nramp family divalent metal transporter 60 430 - -
Acco12g1906 517 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1906 Acco-ChrAcco12 30436893 30439526 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1906 35 501 Inorganic Solute Cotransporters AT2G23150 80.086 0.0 773
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g2063 11 34745887 34748958 Acco12g1906 12 30436893 30439526 CCT
Acco12g1906 12 30436893 30439526 Acco12g1906 12 30436893 30439526 ECH