Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1867 ATGGGAGAAGAGTACGGAAGGATAGTGGTAGTGAGAGAGTTCGATCCCAATAAAGAGAGCGAGAAAGTGGAAGCAGTAGAAAGAATATGTGAAGTTGGACCCAGCGGGAAGCTCTCTCTCTTCACCGACCTCCTAGGTGACCCAATTTGCAGGGTCCGCCACTCCCCTGCTTTCCGCATGCTGGTGGCTGAGATAGGCGATGAGATTGTGGGAATGATAAGAGGTTGCATCAAAACCGTCACATGCGGAAAGAAGCTCCCCAGGAATGGGAACAAATCTCAGTTCACTGAAACCCTCCCTGTATACACAAAACTCGCCTACATCTTAGGTCTTCGCGTTTCTCCTTCTTACCGGAGAATGGGAATAGGATTGAAGCTTGTGAATACAATGGAGGAATGGTTCAGAGGCAATGGAGCTGAATACTCGTACATGGCGACAGAAAAGGACAATTTGGCGTCCGTTATGCTCTTCACCGACAAATGCGGATACTCCAAGTTCCGTACACCGTCGATCCTCGTCAATCCGGTTTTCGCTCATCAGATTAGTATCTCTCAAAAGATCAGTATGATCCAACTCGGTCCCTCTGACGCCGAGAAGCTCTATCGCCGCCGATTCGCCACCACCGAGTTCTTCCCGCGCGACATTCGCTCCATCCTCAACAACAAACTCACCCTCGGAACTTTCCTCGCCGTCCCGCGCGGGTCATTTAGTCCAGACACGTGGCCCGGGTCGGACTTATTCCTCTCCGACCCACCCGAGTCATGGGCGGTTATCAGCGTCTGGAACTGCAAGGAAGTGTTCACGCTCGAGGTCCGAGGCGCGTCGCGCGTGAAGCGTACCCTGGCCAAAACGACTCGGATTGTGGACCGGGCGCTGCCGTTTCTTCAGCTGCCGTCGATCCCGAATTTTTTCCAGCCGTTCGGGTTCCACTTTATGTATGGATTAGGAGGGCAAGGACCTGAGGCGGCGAAGATGGTGAAGGCGTTGTGTGGTCACGCTCACAACCTCGCGAAGGAGCATGGGTGTGGGGCGGTTGTGACGGAGGTTTCGAGCTGTGAACCGTTGAAGTTGGGAATACCACACTGGAAGATGCTATCATGTGCCGAGGATTTATGGTGCATCAAGAGGCTCGGGGAAGACTATAGTGACGGCTCCGTCGGTGACTGGACAAAATCTCCACCTGGATTGTCCATATTCGTTGACCCCAGAGAATTCTAA 1218 0.5296 MGEEYGRIVVVREFDPNKESEKVEAVERICEVGPSGKLSLFTDLLGDPICRVRHSPAFRMLVAEIGDEIVGMIRGCIKTVTCGKKLPRNGNKSQFTETLPVYTKLAYILGLRVSPSYRRMGIGLKLVNTMEEWFRGNGAEYSYMATEKDNLASVMLFTDKCGYSKFRTPSILVNPVFAHQISISQKISMIQLGPSDAEKLYRRRFATTEFFPRDIRSILNNKLTLGTFLAVPRGSFSPDTWPGSDLFLSDPPESWAVISVWNCKEVFTLEVRGASRVKRTLAKTTRIVDRALPFLQLPSIPNFFQPFGFHFMYGLGGQGPEAAKMVKALCGHAHNLAKEHGCGAVVTEVSSCEPLKLGIPHWKMLSCAEDLWCIKRLGEDYSDGSVGDWTKSPPGLSIFVDPREF 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1867 405 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 8 405 - -
Acco12g1867 405 Pfam Acetyltransferase (GNAT) family 56 163 IPR000182 GO:0016747
Acco12g1867 405 Gene3D - 43 169 - -
Acco12g1867 405 CDD NAT_SF 60 141 - -
Acco12g1867 405 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 53 165 IPR016181 -
Acco12g1867 405 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 194 IPR000182 GO:0016747
Acco12g1867 405 FunFam Probable N-acetyltransferase HLS1-like 18 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1867 Acco-ChrAcco12 30013693 30015205 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Acco12g1867 Acetyltransf_1 5.6e-18 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g2031 11 34516981 34518656 Acco12g1867 12 30013693 30015205 CCT
Acco12g1867 12 30013693 30015205 Acco12g1867 12 30013693 30015205 ECH