Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1856 ATGGATACCTTGTTTCGTCTTGTCAGTTTTCAATCTCAACCATCATCAACTGATCCTCACTCCCTCAACAACTCCTCTACCAGCACTAGATCCTCCACACACAACAACAACAACTACTTCCACCACCACCACCAGCAAGACGACGAAGAATGCTTCAACTTTTTCATGGATGAAGAAGACTTGTCCTCCTCTTCTTCTAGACACTACTATCCTTATCATCACCATCCTCATCCGTCCTCCTCCTCCGCTGCTGCCGCTGCCACCGCTGCTGCTACTACTTTCACCACCACCACTCCCACCACCTCTGATTTCTCCTTCTCCTTCTCCCCCACCACAAATGACCTCCACAACTTCGAATTCTCGGGCCGATGGGCGAACGACCTCCTCCTCGAAGCCGCCCGTGCCGTCGCTGACAAGAACACCGCCCGTGTCCAGCAGTTAATCTGGATGCTCAACGAGCTCTCCAGTCCTTATGGTGACACCGATCAGAAGCTCGCCGCTTACTTCCTTCAGGCTCTTTTCAGCCGCGTCACCGACTCTGGCGACCGTACCTACCGCACGTTGGCCTCTGCATCGGAGAAAACATGCTCTTTTGAGTCAACAAGGAAGATGGTGTTGAAGTTCCAAGAAGTCAGCCCTTGGACTACTTTTGGTCACGTCGCTTCCAATGGTGCCATATTAGAGGCCTTAGAAGGTGAGCCAAAGTTGCACATAGTTGATATTAGTGACACATATTGCACCCAGTGGCCTACTCTTCTAGAAGCCCTGGCCACTCGCAGCGATGACACCCCGCACCTCCGGCTAACCACGGTTGTTAGCCGCCGAGTCGGCGGATCCATCACAGCGGTTCAGAAAGTCATGAAGGAGATAGGGGCTAGAATGGAGAAATTCGCTAGGCTCATGGGTGTACCCTTTAAATTCAACGTCATTCACCACGCGGGTGATCTCTCACACCTTAATTTATCCGAATTAGATATTAAAGAGGACGAGGCTCTCGCCATTAACTGTGTCAACACGTTACATTCCGTCACGGGGTTTGGTAATAACCGTGACATATTGATATCCTCGTTTCGGAGATTACAACCTAGGATAGTCACTGTGGTGGAAGATGAGGCTGATCTTGATGTTGGATTTCACGGGTTTGAACTTGTACGAGGTTTTCAAGAATGCTTGAGGTGGTTTAGGGTTTACTTCGAGGCGCTGGAAGAGAGCTTCCCTCGAGCAAGCAACGAGCGTTTAATGCTAGAGAGATCAGCGGGAAGAGCCATCGTTGACTTGGTGGCTTGTGATCCATCGCAGTCGGTAGAACGGCGGGAGAGTGCGGTAAGGTGGTCGCAGCGGCTGCATGGTCGTGGGTTCAACGTGGTGCCGTTCAGCGATGAGGTTTCCGACGACGTGAGAGCTCTGTTGAGGAGGTACAAGGAAGGGTGGGCAATAACACATTGCTCCGACGCCGGAATATTCTTGTCTTGGAAGGAACAGCCGGTGGTGTGGGCCAGTGCATGGAGGCCTTGA 1515 0.5168 MDTLFRLVSFQSQPSSTDPHSLNNSSTSTRSSTHNNNNYFHHHHQQDDEECFNFFMDEEDLSSSSSRHYYPYHHHPHPSSSSAAAAATAAATTFTTTTPTTSDFSFSFSPTTNDLHNFEFSGRWANDLLLEAARAVADKNTARVQQLIWMLNELSSPYGDTDQKLAAYFLQALFSRVTDSGDRTYRTLASASEKTCSFESTRKMVLKFQEVSPWTTFGHVASNGAILEALEGEPKLHIVDISDTYCTQWPTLLEALATRSDDTPHLRLTTVVSRRVGGSITAVQKVMKEIGARMEKFARLMGVPFKFNVIHHAGDLSHLNLSELDIKEDEALAINCVNTLHSVTGFGNNRDILISSFRRLQPRIVTVVEDEADLDVGFHGFELVRGFQECLRWFRVYFEALEESFPRASNERLMLERSAGRAIVDLVACDPSQSVERRESAVRWSQRLHGRGFNVVPFSDEVSDDVRALLRRYKEGWAITHCSDAGIFLSWKEQPVVWASAWRP 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1856 504 Pfam GRAS domain family 127 503 IPR005202 -
Acco12g1856 504 ProSiteProfiles GRAS family profile. 116 503 IPR005202 -
Acco12g1856 504 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 99 493 IPR005202 -
Acco12g1856 504 MobiDBLite consensus disorder prediction 10 39 - -
Acco12g1856 504 MobiDBLite consensus disorder prediction 10 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1856 Acco-ChrAcco12 29887230 29888744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1856 1 504 GRAS Transcription Factor Family AT4G37650 63.534 0.0 601
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Acco12g1856 GRAS 7.5e-106 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco12g1856 12 29887230 29888744 Acco12g1856 12 29887230 29888744 ECH