Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1848 ATGTCTGTGTCCCCAAACCACCACCTGGTAACTCTTGACTTGTTCTGCAATGAAGTAGCTAGCGAGGTGGTTTCATCGGATTCCGATGTTACTAACTGCAAATCATTGGCGCCTTCAACTGTCTCGTGGGATTCTGATGACGAAGGCTGTGTCTTGACCTTACTGGACTCAGAACTTGATCAAATACAGGAAAGACAACTCTCACTTTCTCTGCTTCACCAAAAAACATGGCTCAGAACTGCTCGAGAAGAAGCCGTAAAATGGATGCTAAAGGTGCAAGGTTATTACAGTTTTACGCCAGAGACGGCATGTCTATCTGTGAACTATCTTGACCGTTTTCTTTTGTCACACTCACTACCGCAAGATGAGGCATGGCCATTGCAGCTAGTAGCAGTTGCTTGTCTGTCCGTGGCGGCAAAAATAGAAGAAACAAGTGTGCCACTTTTAGTGGACTTGCAAATGATAGAGCCTAGGTTCTTGTTTGAGCCTAAAACAGTTCAAAGAATGGAGCTTTTGGTTATGGCGGCTCTCAGGTGGCGATTGCGTGCTGTTACTCCTTTTGAGTTTGCTCATCTTTTCATTGCTAAGGCTAATAAGAAGCTGTCATCATGCTCTGCCTCCTGTCACATTATTTCTCGTGTCCAAGATATTATAGTCAGAACATGTTTAGTAACCGATTTCTTAGAGTATCCTCCATCAGTAATAGCAGCTTCTGCTCTGCTTTGGACAACAAAACAATATGTTGATGAACAGAGTCTAAGCTTCTTCCACGAAAATATAAGCGGAGAGATGGTGCAGAAATGTTACAACCTCATGAAGCAGAGGATTATTTTCAGAACAGAACATTTTGCAACAACGAATTCAGATTCTTTGCCCCTAAGCCCTACTTGTGTGCTTGATCACAAAGCCCTGACTTGA 918 0.4325 MSVSPNHHLVTLDLFCNEVASEVVSSDSDVTNCKSLAPSTVSWDSDDEGCVLTLLDSELDQIQERQLSLSLLHQKTWLRTAREEAVKWMLKVQGYYSFTPETACLSVNYLDRFLLSHSLPQDEAWPLQLVAVACLSVAAKIEETSVPLLVDLQMIEPRFLFEPKTVQRMELLVMAALRWRLRAVTPFEFAHLFIAKANKKLSSCSASCHIISRVQDIIVRTCLVTDFLEYPPSVIAASALLWTTKQYVDEQSLSFFHENISGEMVQKCYNLMKQRIIFRTEHFATTNSDSLPLSPTCVLDHKALT 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1848 305 CDD CYCLIN_AtCycD-like_rpt2 184 272 - -
Acco12g1848 305 Pfam Cyclin, C-terminal domain 184 276 IPR004367 -
Acco12g1848 305 CDD CYCLIN_AtCycD-like_rpt1 81 179 - -
Acco12g1848 305 FunFam D6-type cyclin 65 182 - -
Acco12g1848 305 SMART cyclin_7 87 175 IPR013763 -
Acco12g1848 305 Gene3D - 183 269 - -
Acco12g1848 305 Gene3D - 73 182 - -
Acco12g1848 305 ProSitePatterns Cyclins signature. 82 113 IPR006671 -
Acco12g1848 305 PANTHER CYCLINS 73 274 IPR039361 -
Acco12g1848 305 Pfam Cyclin, N-terminal domain 63 181 IPR006671 -
Acco12g1848 305 SUPERFAMILY Cyclin-like 56 181 IPR036915 -
Acco12g1848 305 SUPERFAMILY Cyclin-like 166 276 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1848 Acco-ChrAcco12 29816271 29817614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1848 1 277 Core Cell Cycle Gene Families AT1G70210 41.197 1.07e-56 184