Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1830 ATGGAAACTTCACCTGTAAACTCCTTCTTCTTTGTATGCTTGTCTCTAATTCTTTGGTTTTCAGAGTCTGTAGGAAGCTGGAATAGCTGTCCAGAACCCGAAACATCCTGTGGAAACCTCACGGTCCGATTTCCTTTCCGAATAATAGGACGCCAACCAGAACAATGTGGCTATCCTGGTTTTGATTTACAATGTTCTTCTGCCAATCATTCTGTTCTTGAGCTTCCTGGATCACTCAAGCTCAATGTCAAACTTATTGATTACAAATCCCAAACCATTCAATTATCTGATCCTTCTGGCTGCCTTCTTAGGCATGTCCATAACCTCACCCTTCCTTCCCCTTTCAAATTCATAACCTCATCATATCTCCGTGACTACACCTTTTTCAATTGCTCATCACCAAGAGATGGAGTATTATATTCAACGTGTCTGAGCAGCTCTACCTATCAAGTATATGCCGTTTCTTCTTACGATTATATCTATAGATTATTTCCCTTGTTATTTTGCAGCAAAATATTCAACATTTCATCCATCCTATATGAGATCATTCAACCTCATAACACTCTTTATTTGAAGTGGTCTCATCCAATGTGTGAACACTGTGAATCAAAAGGAGCAAGATGTGGATTCAAGAATAGTAACACCAGTTATGATACTACATGTTTCAAGGTTCGCCACAAAGGCTCATCAAACAAATTTGTAATTACAGGATCAATACTACTTCTAGTGGTGACGCTGGTTATAATTCATTATGTTCGCAACACTTACAAATCAAGAAAAGAAAGCCAGGCAATAATTGAAAAGTTCTTGCAAGATTATAGAGCTCTCAAACCCACCAGATATTCTTATGCTGAAATCAAGAGGATTACCAATCAATTTGAGGTCAAGTTGGGAGAAGGATCATTCGGTACTGTGTTCAAAGGAGATATTTCATCTGAGTTCAAAGTTGCAGTGAAGATGCTCACTAATTATGAAGGAAATGGCGAAGAGTTCGTCACTGAAGTTGGAACAATGGGCAAAATTCATCACATCAACATTATTCGTTTAATGGGCTACTGTGCTGATGGCTTTAGAAGAGCGTTGGTTTATGAATACTTTCCAAATGGTTCATTACAAAATTTTATAAATTCACCAGATAATAGACAAAACTTTATTGGTTGGAAAAGGCTCCATGAAATTGCTCAAGGCATAGCCAAAGGAATTGAGTACCTTCATCAAGGGTGTGAGCAACGCATACTTCATTTTGACATCAAACCTCACAATGTTTTATTAGATAATCACTTCACTCCAAAAATATGTGATTTTGGTTTGGCCAAATTGTGTTCTAAAGATCAAAGCATAGTGTCAATGACTAATGCTAGAGGAACTTTAGGTTACATAGCTCCAGAGGTATTCTCTCGAAATTTTGGGAATGTGTCTCACAAAGCAGATGTTTATAGCTTCGGGATGTTGCTACTTGAATTAACAAGGGGAAGAAGAATTACGCATGACACAAAAGAAAATGCTCCCCACATTCACTATCCTGAATGGATCTATAATATTTTAGAAGAAAGGGACGATGTTAGGATTCATATTGAGGAAGAAGGTGATACTAAAATTGTGAAAAAGTTGGGAATAGTGGGACTATGGTGCATTCAGTGGCATCCTGTGGATCGACCATCAATGCAAGCAGTGGTTAAAATGTTAGAAGGAGAAGAAGATAAATTACCAATACCTCCAAATCCTTTTAATTCTGAAGGCACATCAACAAGAAAAAGGCCTAGCGCGCCTACAAGAAGCCTGATGCAAGGTTTAGAAATAATCCAAGAAGTAGAGTGA 1818 0.379 METSPVNSFFFVCLSLILWFSESVGSWNSCPEPETSCGNLTVRFPFRIIGRQPEQCGYPGFDLQCSSANHSVLELPGSLKLNVKLIDYKSQTIQLSDPSGCLLRHVHNLTLPSPFKFITSSYLRDYTFFNCSSPRDGVLYSTCLSSSTYQVYAVSSYDYIYRLFPLLFCSKIFNISSILYEIIQPHNTLYLKWSHPMCEHCESKGARCGFKNSNTSYDTTCFKVRHKGSSNKFVITGSILLLVVTLVIIHYVRNTYKSRKESQAIIEKFLQDYRALKPTRYSYAEIKRITNQFEVKLGEGSFGTVFKGDISSEFKVAVKMLTNYEGNGEEFVTEVGTMGKIHHINIIRLMGYCADGFRRALVYEYFPNGSLQNFINSPDNRQNFIGWKRLHEIAQGIAKGIEYLHQGCEQRILHFDIKPHNVLLDNHFTPKICDFGLAKLCSKDQSIVSMTNARGTLGYIAPEVFSRNFGNVSHKADVYSFGMLLLELTRGRRITHDTKENAPHIHYPEWIYNILEERDDVRIHIEEEGDTKIVKKLGIVGLWCIQWHPVDRPSMQAVVKMLEGEEDKLPIPPNPFNSEGTSTRKRPSAPTRSLMQGLEIIQEVE 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1830 605 Gene3D Transferase(Phosphotransferase) domain 1 366 570 - -
Acco12g1830 605 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Acco12g1830 605 Pfam Wall-associated receptor kinase galacturonan-binding 30 97 IPR025287 GO:0030247
Acco12g1830 605 MobiDBLite consensus disorder prediction 568 597 - -
Acco12g1830 605 SUPERFAMILY Protein kinase-like (PK-like) 274 563 IPR011009 -
Acco12g1830 605 Pfam Protein kinase domain 294 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1830 605 PANTHER RUST RESISTANCE KINASE LR10-RELATED 262 581 IPR045874 GO:0004672
Acco12g1830 605 SMART serkin_6 291 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1830 605 FunFam PR5-like receptor kinase 366 573 - -
Acco12g1830 605 FunFam serine/threonine-protein kinase PBS1-like 258 365 - -
Acco12g1830 605 Gene3D Phosphorylase Kinase; domain 1 266 365 - -
Acco12g1830 605 ProSiteProfiles Protein kinase domain profile. 291 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1830 605 MobiDBLite consensus disorder prediction 575 590 - -
Acco12g1830 605 ProSitePatterns Protein kinases ATP-binding region signature. 297 319 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1830 Acco-ChrAcco12 29544127 29546287 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1830 198 575 Receptor kinase-like Gene Family AT1G66910 43.672 1.29e-105 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Acco12g1830 Pkinase 2.5e-48 CL0016