Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1825 ATGCATAGTCATCTCGTATTGCTACTTGGGGGAAGCGAGAACATGGAAACTTCATCTGTAGATTCCTTCTTCTCTGTATGCTTGTTTCTAATTCTTTGGTTTTCAGAGTCTGTAGGAAGCTGGAATAGCTGTCCGGAACCCGAAACAACCTGTGGAAACCTGACTATCCGATTTCCTTTCCGAATAATAGGACGCCAACCAGAACAATGTGGCTATCCTGGTTTTGATTTACAATGTTCTTCTGCCAATCATTCTGTTCTTGAGCTTCCTGGATCACTCAAGCTCAATGTCAAACTTATTGATTACAAATCCCAAACCATTCACTTATATGATCCTTCTGGCTGCCTTTTTAGGCGTGTCCATAACCTCACCCTTCCTTCCCCTTTTCAATTCATATCCCCGTATCTCGAAGACTACACCTTTTTCAATTGCTCATCACCAAGAGATGGAGGATTTTTATTATATTCAAAGTGTCTGAGCAGCTCTACCTATCAAGTATATGCCGTTTCTTCTGACTATTTTATCGGAGATTTACCCTTGTTATTTTGCAGCAAAATATTCAACATTTCATCCATCCCGTATGAGATCATTCAACTTCATCATGACACTCTTGATTTGATGTGGTCTCATCCAATGTGTGAACATTGTGAATCAAAAGGAGCAAGATGTGGATTCAAGAATAGTAATACCAGTTATGATACTGCATGTTTCAAGGTTCGCCAAAAAGGCTCATCAAACAAATTTGTAATTACAGGATCAATACTACTTCTAGTGGTGACGCTGGTTGTAATTCATTATGTTCGCAACACTTACAAATCAAGAAAAGAAAGCCAAGCAATAATTGAAAAGTTCCTAAAAGATTATAGAGCTCTTAAGCCCACCAGATATTCTTATGCTGAAATCAAGAGGATTACCAATCAATTTGAGGTCAAGTTGGGAGAAGGATCGTTCGGTACTGTGTTCAAAGGAGACATTTCATCTGAGTACAAAGTTGCAGTGAAGATGCTCACGAATTTTGAAGGAAATGGCGAAGAGTTCGTCACTGAAGTTGGAACAATGGGCAAAATCCATCATGTCAACATTATTCGCTTAATGGGCTTCTGTGCTGATGGCTTTAGAAGAGCGTTGGTTTATAAATACTTTCCAAATGGTTCATTACAAAATTTTATAAATTCACCAGATAATAGGCAAAACTTTATTGGTTGGAAAAAGCTCCATGAAATTGCTCTAGGCGTCGCCAAAGGAATTGAATACCTTCATCAAGGGTGTGAGCAACGTATACTTCATTTTGATATCAAACCTCACAATGTATTATTAGATAATGACTTCACTCCAAAAATATGTGATTTTGGTTTGGCCAAATTGTGCTCCAAAGATCAAAGCATAGTGTCAATGACTAACGCTAGAGGAACTTTGGGTTACATAGCTCCAGAGGTATTCTCTCGAAATTTTGGGAATGTGTCTCACAAAGCAGATGTTTATAGCTTCAGGATGTTGCTACTTGAATTAATAGGGGGAAGAAGAATTACACATGACACAAAAGAAAATGCTCCCCACATTCACTATCCTGAATGGATCTATAATATTTTAGAAGAAAGTGAGGATGTTAGAATTCATATTGAGGAAGAAGGTGATGCTAAAATTGCGAAAAAGTTGGGAATAGTGGGACTATGGTGCATTCAGTGGCATCCTCTAGATCAACCATCAATGCAATTAGTGGTTAAAATGTTAGAAGGAGAAGGAGACAAATTACCATTACCTCCAAATCCTTTTAATTCTGAAGGAACATCAACTAGAAAAAGGGCCAGCGCGCCTACAAGAAGCCTGATGCAAGGTTTAGAAATAATCCAAGAAGTAGAGTGA 1863 0.3827 MHSHLVLLLGGSENMETSSVDSFFSVCLFLILWFSESVGSWNSCPEPETTCGNLTIRFPFRIIGRQPEQCGYPGFDLQCSSANHSVLELPGSLKLNVKLIDYKSQTIHLYDPSGCLFRRVHNLTLPSPFQFISPYLEDYTFFNCSSPRDGGFLLYSKCLSSSTYQVYAVSSDYFIGDLPLLFCSKIFNISSIPYEIIQLHHDTLDLMWSHPMCEHCESKGARCGFKNSNTSYDTACFKVRQKGSSNKFVITGSILLLVVTLVVIHYVRNTYKSRKESQAIIEKFLKDYRALKPTRYSYAEIKRITNQFEVKLGEGSFGTVFKGDISSEYKVAVKMLTNFEGNGEEFVTEVGTMGKIHHVNIIRLMGFCADGFRRALVYKYFPNGSLQNFINSPDNRQNFIGWKKLHEIALGVAKGIEYLHQGCEQRILHFDIKPHNVLLDNDFTPKICDFGLAKLCSKDQSIVSMTNARGTLGYIAPEVFSRNFGNVSHKADVYSFRMLLLELIGGRRITHDTKENAPHIHYPEWIYNILEESEDVRIHIEEEGDAKIAKKLGIVGLWCIQWHPLDQPSMQLVVKMLEGEGDKLPLPPNPFNSEGTSTRKRASAPTRSLMQGLEIIQEVE 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1825 620 Pfam Wall-associated receptor kinase galacturonan-binding 44 111 IPR025287 GO:0030247
Acco12g1825 620 Gene3D Phosphorylase Kinase; domain 1 281 380 - -
Acco12g1825 620 Gene3D Transferase(Phosphotransferase) domain 1 381 584 - -
Acco12g1825 620 MobiDBLite consensus disorder prediction 590 605 - -
Acco12g1825 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Acco12g1825 620 FunFam PR5-like receptor kinase 381 588 - -
Acco12g1825 620 ProSiteProfiles Protein kinase domain profile. 306 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1825 620 Pfam Protein kinase domain 309 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1825 620 ProSitePatterns Protein kinases ATP-binding region signature. 312 334 IPR017441 GO:0005524
Acco12g1825 620 SUPERFAMILY Protein kinase-like (PK-like) 290 578 IPR011009 -
Acco12g1825 620 PANTHER RUST RESISTANCE KINASE LR10-RELATED 277 596 IPR045874 GO:0004672
Acco12g1825 620 SMART serkin_6 306 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1825 620 MobiDBLite consensus disorder prediction 584 607 - -
Acco12g1825 620 FunFam serine/threonine-protein kinase PBS1-like 273 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1825 Acco-ChrAcco12 29497021 29499214 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1825 28 590 Receptor kinase-like Gene Family AT5G38260 35.974 2.82e-109 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Acco12g1825 Pkinase 1.4e-44 CL0016