Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1819 ATGTTGTCCACTCTTCCTCCTTCTGATCCTTTCCTCAATAACCCCTTCTGGGCCTTGGACTGGGAAGGCCCGGGCTTCGGCCCTGACCTCGGCCTGTTCCCGGACCTTCCATCCTTCCCCGTCAAGCCTGCCAGTAAGTCCCAAACCCATGCTGGCTCTGATGTCACCGACGTGAAACACGTGGCGTCTTCCATTCTGGACGAGCGGAAACGGAGGAGAATGATATCGAACCGGGAGTCGGCGAGGCGGTCGCGCATGCGAAAGCAGAAGCATCTAGAGAACTTAAGGTTTCAGGTGAACCGGTTTAGGATCCAGAACCGGGAACTCAACAACAGGTTACAGTTCCTTCTGCATCACTATACTCGTGTGAGCACGGAGAACCAATGGCTCCAGTCCGAGCAAACCCAGCTCCGGCAAAAACTTCACAATATAACACAATTTTTCGCTCTCCAGCCCTTCTCATCCTCGTCCGCATGGCCATGCAATACTACTACCATTTTCACGACAGATTAA 513 0.5322 MLSTLPPSDPFLNNPFWALDWEGPGFGPDLGLFPDLPSFPVKPASKSQTHAGSDVTDVKHVASSILDERKRRRMISNRESARRSRMRKQKHLENLRFQVNRFRIQNRELNNRLQFLLHHYTRVSTENQWLQSEQTQLRQKLHNITQFFALQPFSSSSAWPCNTTTIFTTD 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1819 170 PANTHER BZIP TRANSCRIPTION FACTOR 44 46 151 - -
Acco12g1819 170 CDD bZIP_plant_GBF1 70 120 IPR045314 GO:0003700|GO:0006355
Acco12g1819 170 Pfam bZIP transcription factor 69 121 IPR004827 GO:0003700|GO:0006355
Acco12g1819 170 Gene3D - 67 121 - -
Acco12g1819 170 SUPERFAMILY Leucine zipper domain 69 121 IPR046347 GO:0003700|GO:0006355
Acco12g1819 170 Coils Coil 92 112 - -
Acco12g1819 170 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 72 87 IPR004827 GO:0003700|GO:0006355
Acco12g1819 170 SMART brlzneu 65 129 IPR004827 GO:0003700|GO:0006355
Acco12g1819 170 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 67 116 IPR004827 GO:0003700|GO:0006355
Acco12g1819 170 FunFam BZIP transcription factor 67 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1819 Acco-ChrAcco12 29439115 29439627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1819 59 144 bZIP Transcription Factor Family AT4G37730 54.651 3.95e-24 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Acco12g1819 bZIP_1 2.7e-08 CL0018