Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1813 ATGCCTTCAAGGAGGAATGGAGAATCCAGAAGAAGATGGTACCGTCGCCTTTGTTTGACGAGCAGTGCTGATAGTTCAGACTCGTCGGAATCTGAAACCTATGAACCCCCTCCTCCGGTTGATACGGGCGAACATCATGAACCCCCTCCTCCGGCTGATACAGGCGAACATCACCTTATTCCGTTGCCGCCGCCGGCGACGTACGATTTGCAATTCCACCCACCGCCACCGCCGCCCTTCATCCTGGAAGAGCTCCCGCAACGTGTTCGGCGAATCCATGTATATGTAACTGAAATCGCGAGAGTTGAAGATGATCATCGTGAAGTAATTAGGGATATGGAAATAACGGAGGCGATTACAAGTGAGAAAACCATATGTCCTATATGCAAGGAGGAGTTCAAATTGGGAGAAATTGCAGGCAAATTACCTTGCGACCATTTCTTTTGCTCTGAATGTATTCACGGTTGGATCAATTTCAACCAAAACAATAATTGCCCTGTTTGTCGCCGTCGATTGCCTGCAGTCCCACCACCATCTGGTACCTGGGAATATTTTTTCCCTTCTCCCTTTTATACTGAATCAACAATCGTCGCTGATGAAACTGAGTCGTCTCCCCCATCAATGAATAATAGTGAAGCTGGTTATGACACTGCGCGTGACGAGCTTGATGCATCTCACGCCCATCCACAAGACTCTATTGCTTCTTCTACACCTACCACTGCCTTTCCCTACTCTGCAACTGGATCAACAAAATTCTCATCTTGGAAGAAGCAAGGTCGAAGAGTGAGACACACTAACTTCAAAATCATTCGTTCCCATCGACGGAAAAATGTGCCGTTGGATGCAGCTCCATGCCGAGATGGAGACAGTGGATTGCCTTTAGAAACTGAGAATCGGCTATTTGATGGTGCTGGCTTGGTCTGCCGGTCGCTTTTCAGGAACATGCTTGAAAACAAAGGGTAA 963 0.4766 MPSRRNGESRRRWYRRLCLTSSADSSDSSESETYEPPPPVDTGEHHEPPPPADTGEHHLIPLPPPATYDLQFHPPPPPPFILEELPQRVRRIHVYVTEIARVEDDHREVIRDMEITEAITSEKTICPICKEEFKLGEIAGKLPCDHFFCSECIHGWINFNQNNNCPVCRRRLPAVPPPSGTWEYFFPSPFYTESTIVADETESSPPSMNNSEAGYDTARDELDASHAHPQDSIASSTPTTAFPYSATGSTKFSSWKKQGRRVRHTNFKIIRSHRRKNVPLDAAPCRDGDSGLPLETENRLFDGAGLVCRSLFRNMLENKG 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1813 320 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 58 173 - -
Acco12g1813 320 SMART ring_2 126 168 IPR001841 -
Acco12g1813 320 MobiDBLite consensus disorder prediction 20 79 - -
Acco12g1813 320 Pfam Ring finger domain 125 169 IPR001841 -
Acco12g1813 320 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 111 177 IPR013083 -
Acco12g1813 320 MobiDBLite consensus disorder prediction 39 53 - -
Acco12g1813 320 ProSiteProfiles Zinc finger RING-type profile. 126 169 IPR001841 -
Acco12g1813 320 SUPERFAMILY RING/U-box 116 176 - -
Acco12g1813 320 ProSitePatterns Zinc finger RING-type signature. 144 153 IPR017907 -
Acco12g1813 320 MobiDBLite consensus disorder prediction 20 35 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1813 108 169 C3H Transcription Factor Family AT1G68180 41.935 1.05e-10 59.3