Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1792 ATGGAAGTTCTCGCTCTCAGACATTTCCCCTTTTTACTATACTCTCTACTGTTCGTGTGTCATTTCTCACCCCATGCTTCTTCAATGGCTGACTCTCAGATTCTTCTGCGGGTTAAGACTACTCAGATCGTTGATGAGAATGGCAGCCTCAAAAACTGGGACAGAGGACTCAGTCCCTGCAACTGGATTGGCGTTACCTGTGATCAATTCAATCGCTCCGTTGTCTCCATTGACCTCTCTGGTACTGGCATTTCTGGTGGATTTCCGTTTGGTTTTTGTCGCATTTGGACCCTGCGGACGCTCTCTGTTGCGCAAAATTATCTCGGCGGTGTTGTCTCTCCACAATCACTCCTTCTCTGTTCCCAACTTCTTGTCTTGAACCTCTCTGATAACTTATTTGTCGGTGAGTTGCCGCAATTCTCGTCGGAGTTTTCTGAACTGAGACGGCTTGATTTCTCTCGGAACAACTTCACTGGCGATATTCCTGCAAGTTTTGGCCGGTTTCCAAATCTCAGGGTGCTCAGCTTGTCTTCGAACTTGCTCAACGGAACTATTCCCGCGTTCTTGGGAAATCTCAGTGAGTTAACTCGATTGGAACTCGCTTATAATCCGTTCACGCCAGGACCATTACCTTCCCAACTAGGAAATTTATCGAACCTCGAAGTTATGTTCATGCCCGGTTCAAACGTCGAAGGGAGCATACCGGACTCAATAGGGAAGCTGATCTCGCTCAAGAACTTGGATTTGTCGGAAAATTTGTTGTCAGGTAAAATTCCTGATAGCTTTTCGGGTTTGAAAAGTGTAGAACAAATTGTGCTATTTCTAAACCAACTTTCAGGTGAAATTCCTCAAGGTTTGGGAAACCTTAGCAGTTTGATTAGTTTAGACGTCTCTCAAAATAGTCTCACAGGGAAATTGCCGGATTCATTCGCTGCCTTGCGGCTCTGTTATCTGTCATTGAACGACAATTTCCTCGAAGGAGAAATCCCTGGTAATGTAGCTGCAAATCCAAATTTATTGATATTAAAACTCTTTAATAACAGCTTCACCGGGAAACTACCCAAAGATCTCGGTCGAAACTCCGATTTACAGGAGCTTGATGTTTCTACCAATGACTTAGTTGGTGAATTGCCTAATTACCTCTGTGAAAGGAACAAGTTGCAGCGTCTTATCACATTTAGGAATCGTTTTTCCGGAACTTTCCCTGAGCAATATGGTGACTGTCATTCGCTTTTCTATGTCAGAATTGAGTACAACCAGCTCTCCGGTGAGGTGCCTCCAGCATTCTGGAAACTTCCTGGCCTTGAAATTTTGAAAATGAATAACAACTTGTTGGCAGGTTCAGTCTCTATCTCCGGCGCTCGGAAACTCTCCGTACTTCAAATATCTGGTAACAGGTTTTCTGGACATTTTTCTGCAGAAATTTGTGAACTCCACAATATTAGAGAGATCGACATTAGCCGGAACCAGTTTACCGGTGAAGTTCCGTCATGTATAACTGGATTAAAGAAGTTGCAGAAGCTGAGCATGCAAGAGAACATGTTCACCTGCGCGATTCCTCGTAATGTGAATTCCTGGGCTGAATTGACCCTATTGAACTTGTCATATAACCGATTGTCCGGTACGATTCCGCCAGAGCTTGGTAATTTGCTACATTTGAGTTCTCTTGATCTTGCCATGAATTTCCTGACCGGAGGAATTCCGCCGGAGTTAGCTAAGCTCAAGCTCAGCGAGTTCAATGTGTCGGGAAACAAATTGTCTGGAAACGTACCTTCAGGGTTCAACAATGAATTCTATTTGGCGGGTCTGATTGGTAATCCGAACCTCTGCAGCGAAGTCATGAAATCCCTCCATCCTTGTTCCGAATCCAAGCACTTATCTTCGGTAGCTATTATTGTGTTATCTACCTCCATCGTACTCCTTGTGGGGTTTCTCCTCTTGTTCCTCAAGAGCAAGAAGTCATTCTTTTTAACTGGCAAAACCAAGCGCTCTTTTAGGACAACAACATTCCATATGGTGGGGTTTAAGGAAGAAGATGTTATTCCATTGCTAACCAGTGAGAATCTCATTGGCACAGGGAGCTCAGGCCAGGTCTATAGGGTGATGCTCAAGACAGGGGAGAGAGTTGCTGTGAAGAAGCTGTGGGAAGGAAGTTCAGGAAAACTGAATACAGATTCTGTTTTAAAATCGGAGGTTGAGACACTGGGTAGAATTCGACATGTTGATATAGTGAAATTGCTATATAGCTGCAGTGGTGATAATTTCCAGATTCTGGTGTACGAGTATTTAGAGAACGGCAGCTTGAGTGACGTTTTGCACGGTGACAAGTTCACAGAGTTGATGGATTGGTCAAGGCGGTTCAACATAGCAGTAGGTGCAGCTCGGGGACTGGCTTATTTACACCACGACTGTGTGCCACCTATAGTTCATAGAGACGTCAAGAGTAGTAACATCTTGCTGGATCATGATTTCAGACCTCGTGTTGCAGACTTTGGATTGGCTAAGACTTTGCAGCCAAAGGCAAACGAAGATGGTGTTAGTGCTATATCCAAGGTCGCTGGGTCCTATGGTTACATTGCTCCAGAATATGCTTACACACTTAAAGTAACTCTGAAAAGTGATGTGTATAGCTATGGTGTACTACTGATGGAATTGATCACTGGCAAGAGGCCAAATGACCCATCCTTTGGTGAGAACAGGGGTATAGTGAAGTGGCTCACTGAGACTGCTTTATCAAGTTCAATAAGAGGGGGTGCCAATGTGGAAGGTCATAGCCATGACCTGGTTCAGATTGTAGACCCAAGATTGAACCCCTCCACGTGTGACTATGAAGATATTGGGAGGGTTTTGAATGTGGCTCTGCTGTGCACCTCAGCGTTCCCCATGAATAGACCTTCAATGAGAAGAGTAGTGGACTTGCTCAGGGAACATAAGAGTGTGCAAACTTATGCTGCTGAAGCAACTGAAAGAATGAGAGAATTTCCAATTTTGTGTGATGTCAGCGAAGGGACAAGAATGAGACGAGAAAATTTTATTCATTTGACTATCATTATTCATAAGATTGGGTACGTTCCCTTGTTCAAGCAGAAAAGAAATTATTATGTTTTCCCTTCTGTTCAGGAATGTTTGACCTATAAGCAAGCCTGCCCGGGAAAGCTGCAGTTGTGGCCTTTTGGGGTTTCTGATGATGATTGCTGTAAATTTGGAGCAGGAAATTAG 3219 0.4408 MEVLALRHFPFLLYSLLFVCHFSPHASSMADSQILLRVKTTQIVDENGSLKNWDRGLSPCNWIGVTCDQFNRSVVSIDLSGTGISGGFPFGFCRIWTLRTLSVAQNYLGGVVSPQSLLLCSQLLVLNLSDNLFVGELPQFSSEFSELRRLDFSRNNFTGDIPASFGRFPNLRVLSLSSNLLNGTIPAFLGNLSELTRLELAYNPFTPGPLPSQLGNLSNLEVMFMPGSNVEGSIPDSIGKLISLKNLDLSENLLSGKIPDSFSGLKSVEQIVLFLNQLSGEIPQGLGNLSSLISLDVSQNSLTGKLPDSFAALRLCYLSLNDNFLEGEIPGNVAANPNLLILKLFNNSFTGKLPKDLGRNSDLQELDVSTNDLVGELPNYLCERNKLQRLITFRNRFSGTFPEQYGDCHSLFYVRIEYNQLSGEVPPAFWKLPGLEILKMNNNLLAGSVSISGARKLSVLQISGNRFSGHFSAEICELHNIREIDISRNQFTGEVPSCITGLKKLQKLSMQENMFTCAIPRNVNSWAELTLLNLSYNRLSGTIPPELGNLLHLSSLDLAMNFLTGGIPPELAKLKLSEFNVSGNKLSGNVPSGFNNEFYLAGLIGNPNLCSEVMKSLHPCSESKHLSSVAIIVLSTSIVLLVGFLLLFLKSKKSFFLTGKTKRSFRTTTFHMVGFKEEDVIPLLTSENLIGTGSSGQVYRVMLKTGERVAVKKLWEGSSGKLNTDSVLKSEVETLGRIRHVDIVKLLYSCSGDNFQILVYEYLENGSLSDVLHGDKFTELMDWSRRFNIAVGAARGLAYLHHDCVPPIVHRDVKSSNILLDHDFRPRVADFGLAKTLQPKANEDGVSAISKVAGSYGYIAPEYAYTLKVTLKSDVYSYGVLLMELITGKRPNDPSFGENRGIVKWLTETALSSSIRGGANVEGHSHDLVQIVDPRLNPSTCDYEDIGRVLNVALLCTSAFPMNRPSMRRVVDLLREHKSVQTYAAEATERMREFPILCDVSEGTRMRRENFIHLTIIIHKIGYVPLFKQKRNYYVFPSVQECLTYKQACPGKLQLWPFGVSDDDCCKFGAGN 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1792 1072 FunFam Leucine-rich repeat receptor-like protein kinase TDR 310 622 - -
Acco12g1792 1072 ProSitePatterns Protein kinases ATP-binding region signature. 690 713 IPR017441 GO:0005524
Acco12g1792 1072 FunFam Leucine-rich repeat receptor-like protein kinase 28 186 - -
Acco12g1792 1072 Gene3D Ribonuclease Inhibitor 314 623 IPR032675 -
Acco12g1792 1072 Pfam Protein kinase domain 686 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1792 1072 Pfam Leucine Rich Repeat 291 313 IPR001611 GO:0005515
Acco12g1792 1072 Pfam Leucine Rich Repeat 243 265 IPR001611 GO:0005515
Acco12g1792 1072 SUPERFAMILY L domain-like 312 626 - -
Acco12g1792 1072 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 187 282 - -
Acco12g1792 1072 SMART serkin_6 684 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1792 1072 Pfam Leucine rich repeat 146 204 IPR001611 GO:0005515
Acco12g1792 1072 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
Acco12g1792 1072 Gene3D Transferase(Phosphotransferase) domain 1 763 996 - -
Acco12g1792 1072 Gene3D Ribonuclease Inhibitor 28 313 IPR032675 -
Acco12g1792 1072 SUPERFAMILY Protein kinase-like (PK-like) 684 974 IPR011009 -
Acco12g1792 1072 FunFam Leucine-rich repeat receptor-like protein kinase 763 991 - -
Acco12g1792 1072 SUPERFAMILY L domain-like 32 313 - -
Acco12g1792 1072 ProSiteProfiles Protein kinase domain profile. 684 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1792 1072 ProSitePatterns Serine/Threonine protein kinases active-site signature. 808 820 IPR008271 GO:0004672|GO:0006468
Acco12g1792 1072 Gene3D Phosphorylase Kinase; domain 1 678 762 - -
Acco12g1792 1072 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 237 975 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1792 Acco-ChrAcco12 29158922 29163052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1792 25 981 Receptor kinase-like Gene Family AT5G65710 54.816 0.0 1018
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Acco12g1792 Pkinase 1.5e-42 CL0016