Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1787 ATGGAAGCTGAATTCATAAGCAACCCCAATTACTATCAGGGGATGGAGGATACTGGATTGTTTGAGGAGTTACCGATGGATTATTTTGATGGTCTTGATTTCCATTCCTTGATTTCCGATTCCTCTAATCACCAGAATCCTGAGTCAAATATTATTTCGCCACCACCACCTCCAACACCAAATAATTCTGCGACTACTTCCAGACTCATTTCTTTTCAGCAATCCAATAATAATAATAATGCGCACCGATTTTACAATAATCTGGGTTCCAATGTCAAGCTTGAAACCCCGAATGGAGAATCCGTATTGAATTTTCAGTCTTTAAGCCCTCAAGGTGTATACTTTGAATACATAAATGAGAGGCAGACGGCGAAGAACATGGCCGGCACCGTCGTGACCAGAAATCCACCCCAAGCTCAAGATCACGTCTTGGCCGAAAGAAGACGAAGGGAAAAGTTGAACCAGAAGTTCATTGCTCTCTCCTCCATCATTCCTGGCCGCAAGAAGATGGACAAGGCATCAGTTTTGGGAGATGCTATAGAGTATGTAAAACAACTGAAGGAACGCCAGAAGGTTTTAGAAGAACAAGTGGCCATGAAAAGAAAGGAATCAGCGAGAAGATGTATTCTCTTCGCCGGCGACAATGGTAAGTCGCCGTCCGGTGAAGTTTCCGAGCAGGCATGGGCAGAAATGGAAGCCAGGGTTTTGGGTAAAGAAGTACTCATCAGAATCCAATACGAGCAACAAAAAGGGTGTGAGGCTAAAATACTTAGAGAATTAGAAAACCTTCGTCTCACAGTTAAAAGCAGTAGCTTCTTGCCATTTGGTGAAACCACTCTATATATAACTATCATAGCTAAGATGGAGAAGGAGAACAGTATGACAGCAAATGATTTAGTGACAAGTCTGAGGAAGGCATTCACATTATTCGAATAG 936 0.4252 MEAEFISNPNYYQGMEDTGLFEELPMDYFDGLDFHSLISDSSNHQNPESNIISPPPPPTPNNSATTSRLISFQQSNNNNNAHRFYNNLGSNVKLETPNGESVLNFQSLSPQGVYFEYINERQTAKNMAGTVVTRNPPQAQDHVLAERRRREKLNQKFIALSSIIPGRKKMDKASVLGDAIEYVKQLKERQKVLEEQVAMKRKESARRCILFAGDNGKSPSGEVSEQAWAEMEARVLGKEVLIRIQYEQQKGCEAKILRELENLRLTVKSSSFLPFGETTLYITIIAKMEKENSMTANDLVTSLRKAFTLFE 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1787 311 PANTHER BHLH TRANSCRIPTION FACTOR 41 307 - -
Acco12g1787 311 SMART finulus 143 192 IPR011598 GO:0046983
Acco12g1787 311 Pfam Helix-loop-helix DNA-binding domain 140 187 IPR011598 GO:0046983
Acco12g1787 311 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 137 186 IPR011598 GO:0046983
Acco12g1787 311 MobiDBLite consensus disorder prediction 39 66 - -
Acco12g1787 311 Coils Coil 183 203 - -
Acco12g1787 311 Gene3D - 134 198 IPR036638 GO:0046983
Acco12g1787 311 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 141 204 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1787 Acco-ChrAcco12 29074074 29075449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1787 48 310 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 40.143 1.71e-47 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco12g1787 HLH 4.7e-12 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco12g1787 12 29074074 29075449 Acco12g1787 12 29074074 29075449 ECH