Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1779 ATGGGTACAGAGATTGGCCTTCTCTCCTCCATGACCCAGATCCAAAAATTGTCAGAATCCCAATACAACCACCATCCCAATAATCACAATAATTACCTTCTTCTTCATCGTCAATCTCACCCTCTCTCAAACCCTAGCTCTTCTTCTTCTTCAACCTCCTTCTGGATCATGTGGAACCCTAGGGATCCTCAGGAAGAAGATGACTCCTGGGAGGTTAGAGCTTTTGCTGAGGACACCACTAACATCATGGGCACCACTTGGCCTCCCAGGTCCTACACCTGCACTTTTTGTCGTAGAGAGTTCCGTTCAGCCCAAGCTCTCGGCGGCCACATGAATGTTCACCGCCGTGACCGTGCCCGTCTCCACCACCACCACCACCAACTACCACCACCACCTGCTGCTTCTGCTTCTGCTTCCGCTCCCGCTTCCGTTCACAACAACCTAATCTCGCCTCACCATCATCACCAAGAGCTTGTTGTTGCTAATAACAACAACGGAAGATTCTTTCTCTGCCATTTACCAAACCCTGATGGGATTGGAAACTTCTCTGGCACTAATAATTATAGTTCTCATAATCTTGCTTCTTCTTCTTCTTCTTTGAATGCATGTGGAGATTCATCAGTATCTGTATCACCCACCACGCTTCTCTCTATTTTGCCCTACCCACCAAGCAATAATAACTTGGTGTCAAGTACTAGTACCACCCCCTCCTATGATTTTCAATTGGAGGGGCGGCCTCGAGGATTCGTTAATTCTTCTTCTTCTTCTTATTGTGATTCTAGCAACAAAGTGGAACAGCCCACGACCTCGCCCTTCTCTGGCCACGGTGGCCACGAGGAGCTTGATCTAGAGCTCCGGCTGGGGCACAGACCACCTGCACCATGA 885 0.4893 MGTEIGLLSSMTQIQKLSESQYNHHPNNHNNYLLLHRQSHPLSNPSSSSSSTSFWIMWNPRDPQEEDDSWEVRAFAEDTTNIMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHHHHHQLPPPPAASASASAPASVHNNLISPHHHHQELVVANNNNGRFFLCHLPNPDGIGNFSGTNNYSSHNLASSSSSLNACGDSSVSVSPTTLLSILPYPPSNNNLVSSTSTTPSYDFQLEGRPRGFVNSSSSSYCDSSNKVEQPTTSPFSGHGGHEELDLELRLGHRPPAP 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1779 294 ProSiteProfiles Zinc finger C2H2 type domain profile. 92 119 IPR013087 -
Acco12g1779 294 Gene3D Classic Zinc Finger 80 138 - -
Acco12g1779 294 ProSitePatterns Zinc finger C2H2 type domain signature. 94 114 IPR013087 -
Acco12g1779 294 MobiDBLite consensus disorder prediction 119 147 - -
Acco12g1779 294 MobiDBLite consensus disorder prediction 251 294 - -
Acco12g1779 294 MobiDBLite consensus disorder prediction 251 273 - -
Acco12g1779 294 SUPERFAMILY beta-beta-alpha zinc fingers 89 119 IPR036236 -
Acco12g1779 294 PANTHER OS07G0101800 PROTEIN 64 291 - -
Acco12g1779 294 SMART c2h2final6 92 114 IPR013087 -
Acco12g1779 294 Pfam C2H2-type zinc finger 92 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1779 Acco-ChrAcco12 28961837 28962721 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1779 57 184 C2H2 Transcription Factor Family AT4G17810 50.370 1.20e-32 117