Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1778 ATGGATTTAGACACTGCTTCTCGCTTTGTTCCAAATCTCCACAGGTCGAACTTACGCCTTCCCCAGCAGCAGCAACCCGAATCCGAAGAAGATGCACATAGGTCGAATCCATTTTCCGGCGACGATGGTCCCCACCAAGGCCTTGAGCTGGCCTCCACGGGACCCGGCGACATCGTGGCACGTCGACCACGTGGACGGCCGCCGGGATCCAAGAACAAGGCCAAGCCACCGGTCATAATAACCAGAGAGAGTGCCAATACCTTACGAGCTCATATCCTCGAAGTCGGTAACGGTTGCGACGTGTTTGACTGCGTTGCCACCTACGCTCGCCGGAGGCAGCGTGGGATCTGTATTTTAAGTGGAAGTGGCACGGTGACGAATGTGACCCTAAGGCAGCCTGGTGGTGCTGGAGCTGTAGTGAGTCTTCATGGACGGTTCGAGATATTGTCGTTGTCGGGATCGTTTCTGCCGCCTCCGGCACCGCCCGGTGCGACGAGCCTTACGATATATTTGGGCGTAGGGCAAGGGCAAGTTGTCGGAGGAAGCGTGGTGGGTGAGCTGAGAGCGGCGGGTCCGGTGATCGTGATCGCTTCTTCGTTTACGAACGTGGCGTACGAGAGACTTCCGTTGGATGAGGAGGAGCAGGAGCAGCTTCAGATGCAGACACCTGGCTCCGGTGAGGGCGGTTCCGGTGGCGGGGGCGGCGGTGGAGGCGGAGGCGGAGGGAATAACTCTTATCCTGACCCGTCTTCTGGTCTACCTTTCTTCAATTTGCCGCTTAATATGCCACATCAGCAGCAGCAGCACAATGTTCAGTTGCCGGTCGACGGCTGGACCGGAAACTCCGGTTCACGTCCGTCCTTTTAA 867 0.5767 MDLDTASRFVPNLHRSNLRLPQQQQPESEEDAHRSNPFSGDDGPHQGLELASTGPGDIVARRPRGRPPGSKNKAKPPVIITRESANTLRAHILEVGNGCDVFDCVATYARRRQRGICILSGSGTVTNVTLRQPGGAGAVVSLHGRFEILSLSGSFLPPPAPPGATSLTIYLGVGQGQVVGGSVVGELRAAGPVIVIASSFTNVAYERLPLDEEEQEQLQMQTPGSGEGGSGGGGGGGGGGGGNNSYPDPSSGLPFFNLPLNMPHQQQQHNVQLPVDGWTGNSGSRPSF 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1778 288 FunFam AT-hook motif nuclear-localized protein 88 215 - -
Acco12g1778 288 Pfam Plants and Prokaryotes Conserved (PCC) domain 89 202 IPR005175 -
Acco12g1778 288 SUPERFAMILY AF0104/ALDC/Ptd012-like 85 219 - -
Acco12g1778 288 MobiDBLite consensus disorder prediction 213 288 - -
Acco12g1778 288 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 28 262 IPR014476 GO:0003680
Acco12g1778 288 ProSiteProfiles PPC domain profile profile. 85 221 IPR005175 -
Acco12g1778 288 PIRSF ESCAROLA 4 288 IPR014476 GO:0003680
Acco12g1778 288 MobiDBLite consensus disorder prediction 1 78 - -
Acco12g1778 288 MobiDBLite consensus disorder prediction 260 288 - -
Acco12g1778 288 CDD DUF296 89 164 IPR005175 -
Acco12g1778 288 Gene3D - 88 223 - -
Acco12g1778 288 MobiDBLite consensus disorder prediction 10 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1778 Acco-ChrAcco12 28927017 28927883 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1778 1 288 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 63.072 4.56e-95 280