Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1769 ATGGGTTGCACTGTAAGGGAAAAGCACTTCCGTGTTAATCGGAGGCCTCGATCATCCAAACCCGATATGGATTCATGTTGTTTTCTCGATAATGCTTCTTTCTCCAAATCTATACTGGAATCAAGCATGAAGCCTTTGAAAAACCATCTCGCTATCAACGATTCTTCACAAAATCTAAATTCCAACTCTAATCATACCCTTAACCCTAATTTCTCCCTTAATGTTGAGGAGACCGGTTGGGGTTACTGCACAGAAGAACAATTAGAAGAAATTCTGTTAAAAAACTTGGAATACTTGTATAATGAAGCTGTATCAAAGTTTGTTGCGTTGGGCTACGATGAGGACGTTGCTATCAAAGCAATTCTGCGAAATGGGCACTGTAATGGTGGAATGGATGCGCTCACCAATATATTACATAATTCGTTGGCTTATTTGAATAGTAACTGTAGTAGTAATTGTACTAGTGGTAATGGCAATTCGGATGAGTCCGGTCCTGTTTTCTCTGACTTGAGGCAGTTGGAGGAGTACTCTCTGGAAGGCATGGTCGGTTTGCTCCGGCAAGTCAGGCCGCATTTGAGTAAAGGCGATGCTATGTGGTGTTTGCTTATGAGTGATCTTCATGTCGGACGGGCAAGTGCTATGGAAATTCCATTGCATCCTGCTCCAGGTAATGGTTGTCCAGCTCCTAGTGCCTCTGAGGCTGTTAGCAATTCTGTTGATGTTTTGGCCCCTACCCTATGTAGGTTTCATGGGGGTTGGGGATTTGGAAATGGGGGAGGCTCAGATCTCCCCTTCAATGGATTCTTCTCTTATAGTGCAGAGATGAATTTACAAAGAGATATTGAACTTCCCAAAAGGTTTAATCTTTCTCCTTCAATGAAGTCTTTATTGAAAAGAAATGTTGCAATGTTTGCTGCTGGTTTTAGGGCAAATTCAAAACAATTGCAGACACAGGCTAAGGCCCCCAGCACTATCACTTTGTCAAGCTTGGAATCTCCAGCTGTATCTGGGACTGATGTCCCAACTGAGCAGTCTGGGGATTCTCAGAAGCTGAATAACCATGATGCAGTGAGCTCAGTGTTGAGCAAATTCCATGACCTGAATCTTGATGAGAATTTGGAGCATGTGACAGAAAATCAGAAAGATGAGGTAATTGTCAATCTATTTCATCAGATTAAGGATCTTGAGAAACAGTTAGAGGAGCGAAAAGATTGGGCCCATCAGAAGGCAATACAGGCCGCAAGAAAGTTAAGCAATGATTTGACTGAACTGACAATGTTGAGGATGGAAAGAGAGGAGACTCAGAGATTGAAGAAAGGGAAACAGGCGCTTGAGGACACAACCATGAAAAGACTCTCAGAGATGGAGAATGCTTTAAGAAAGGCCAGTGGTGAAGTGGACCGTGCAAATGCAGCTGTGAGACGGCTTGAGACAGAGAATGCAGAAATTAAAGCAGAGATGGAAGCTTCCAAATTAAGTGCTTCAGAATCAGTTTCAACTTGCTTGCAAGCAGCAAAGAGGGAGAAAAAGTGTATGAAGAGGCTTGTAGCTTGGGAAAAACAGAAAGCTCAGCTACAGCGAGAAATTTCAGGTGAGAAAGGGAAGATATTGGAGATACAGGAAGAATTAGTTCAGATCAAACAGCGTCAAAAAGATGCCGAGGTCAAGTGGAGGGAGGAGTTGAAGGCTAAAGAGGAAGCCTTAGGATTAGTTGAGGAGGAGCGACGTGCTAAGGAAGCAGCGGAGGCTAATAACAAGCGGAAGCTTGAAGCTTTGCGCCTAAAGATAGAGATAGATTTCCAGTGCCACATGGATGATCTCCTAAGGCTCGAGCAGGAGCTTTCACGCATAAAAGCATCTGCTCAGTCTGCTGACTTTCAAAATCAATCAAATACTTCACCTGCATGTGAGTCTGAGGGTGCAAATCCCCAAAGAGAGACAATTGCTAAGATGCTTCTAGAATTAGAGAAACAGGAGGCCTTTTCAGATAAAGAAGTGAACTGTGATAGGGAATGCATAATATGCATGAAAGATGAAGTATCTGTTGTTTTCTTGCCTTGTGCCCACCAAGTTATGTGTGCTAGTTGCAGTGATGAGTATGGGAGGAAGGGCAAAGCTGCTTGTCCTTGCTGTCATGTTCCGATTGAGCAGAGGATTCACGTATTCGGGGCAAGTTCGTAG 2181 0.4347 MGCTVREKHFRVNRRPRSSKPDMDSCCFLDNASFSKSILESSMKPLKNHLAINDSSQNLNSNSNHTLNPNFSLNVEETGWGYCTEEQLEEILLKNLEYLYNEAVSKFVALGYDEDVAIKAILRNGHCNGGMDALTNILHNSLAYLNSNCSSNCTSGNGNSDESGPVFSDLRQLEEYSLEGMVGLLRQVRPHLSKGDAMWCLLMSDLHVGRASAMEIPLHPAPGNGCPAPSASEAVSNSVDVLAPTLCRFHGGWGFGNGGGSDLPFNGFFSYSAEMNLQRDIELPKRFNLSPSMKSLLKRNVAMFAAGFRANSKQLQTQAKAPSTITLSSLESPAVSGTDVPTEQSGDSQKLNNHDAVSSVLSKFHDLNLDENLEHVTENQKDEVIVNLFHQIKDLEKQLEERKDWAHQKAIQAARKLSNDLTELTMLRMEREETQRLKKGKQALEDTTMKRLSEMENALRKASGEVDRANAAVRRLETENAEIKAEMEASKLSASESVSTCLQAAKREKKCMKRLVAWEKQKAQLQREISGEKGKILEIQEELVQIKQRQKDAEVKWREELKAKEEALGLVEEERRAKEAAEANNKRKLEALRLKIEIDFQCHMDDLLRLEQELSRIKASAQSADFQNQSNTSPACESEGANPQRETIAKMLLELEKQEAFSDKEVNCDRECIICMKDEVSVVFLPCAHQVMCASCSDEYGRKGKAACPCCHVPIEQRIHVFGASS 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1769 726 MobiDBLite consensus disorder prediction 622 642 - -
Acco12g1769 726 Coils Coil 508 556 - -
Acco12g1769 726 Pfam Family of unknown function (DUF6592) 95 214 IPR046527 -
Acco12g1769 726 Coils Coil 561 591 - -
Acco12g1769 726 MobiDBLite consensus disorder prediction 622 640 - -
Acco12g1769 726 SUPERFAMILY RING/U-box 660 718 - -
Acco12g1769 726 Coils Coil 452 493 - -
Acco12g1769 726 SMART ring_2 672 711 IPR001841 -
Acco12g1769 726 Pfam Zinc finger, C3HC4 type (RING finger) 669 717 - -
Acco12g1769 726 MobiDBLite consensus disorder prediction 324 352 - -
Acco12g1769 726 ProSiteProfiles Zinc finger RING-type profile. 672 712 IPR001841 -
Acco12g1769 726 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 647 723 IPR013083 -
Acco12g1769 726 PANTHER OS05G0141500 PROTEIN 1 721 IPR046934 -
Acco12g1769 726 CDD RING-HC_MIP1-like 669 721 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1769 Acco-ChrAcco12 28827926 28831691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1769 672 722 C3H Transcription Factor Family AT1G73950 43.137 5.13e-07 50.8