Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1753 ATGGTTTGCACTGCTAACGATATACACGAGTGGAAAGATTTTCCAAAGGGACTTAGGGTTCTTCTCCTTGATGGAGACAGCAATTCTGCATCGGAGATAAGAACAAAGCTTGAGGCCATGGACTATATCGTTTCTACATTCTGTGATGAGAATGAAGCCTTGTCAGCAATCTCCAGTAAACCTGAAGGCTTCCATGTTGCCATAGTGGAGGTTTGTACCAGCAACATCGGAAGTTTCAAAATTCTTGAGCATGCTAAAGACTTGCCTATCATCATGGCTTCAAACACTCACTGCTTAAGCACCATGATGAAGTGTGTAGTGCTTGGTGCGGTTGAGTTCCTAAGAAAACCACTCTCTGAGGAAAAACTCAGGAATATCTGGCAGCATGTTGTTCACAAGGCATTCAACACTGGGACAAGTGTTCTTCCTAAATCACTAGAACCGGTCAAAGAATCTGTGGTATTGCAGCTTCAAACAGACGGTGGAGAGCATGAAAGTGTAAACTTGAAGGAGTCTAGGTTCAGTGATGATGACCGTGAGCAGTCTGCCGGAAGTGACAAGTACCCAGCTCCTTCGACTCCACAATTAAAACATGGGGCAAGGTTAATGGATCACGGAGATTGCCAAGAACAAACTAATTGCTCAACAGAAAAGGAAAGTGAGGACCATGATGGGGAATCTAAATTTGTCGAAACTACATGTGGGGTTTTGAATTCTGAAGGTACTTGTAAACCAGTAAAACCTGCAAAGGCTCTGAACATGGAGGATGAGAACCTTGCAAATGATTCCAAGAGTGAGAAAGTTGTTTCTCGACCTGTACATGATAGTGTTCTCAGCAACACTGAAGTTGATACTGTATCTCCAAATAAATCAGGTGTTCATAGTGGTTCCCGTCAAATCAAAACCAAGAAGAAGGTAGACTGGACCCCTCAGCTGCACAAGAAGTTTGTTAAGGCAGTGGAACAATTAGGGGTTGATCAAGCAATTCCTTCTCGGATACTGGAATTAATGAATGTGGAGGGCTTAACAAGGCATAATGTGGCAAGTCATCTTCAGAAATATAGAATGCATAGGAGGCAAATCTTGCCGAAGGAAGATCGAAGATGGGTACAAAGACCAGTGATGTCTTTCCCTCCATATTATTCTAACTGCACCCCATCACCATCTCCTGTGTATCCTATCTGGGGACAATCTGGCAATCAACCAGCCGGTATGCATGCTTGGGGTCTGCCTGGTTATCCACTGTGGCATCCTACTGAAAATTGGCACTGGACGCCATATCATAGGATACATGCAGATGCATGGGGTTGCCCAGTGTTGCCAGCTTCTCAAAGTCCTTGTATTTCATACTCTCAAAATATACCTGGATGGCACAATGCTAATTCTGTTAATTATAGTGCAAGCAAGTTACAGAATTCCTGTGAATATCATCCAGCAGAAGATGTTGTTGACAAGGCAGTGAAGGAGGCAATAAGTAAGCCAGGGCTACCAATGCCTTTAGGCCTCAAACCTCCTTCCATTGATTGTGTGTTGTCAGAGCTCTCTAGGCAAGGCATTTCCTCCATCCCTACTTGCTCTAGGCATGCTAAACCAGAACTGAAACCGGAACCCAAACCCCAGGGACCCCCTCTGGGGGATCAGCCAGTGCCCTTGTGA 1656 0.4463 MVCTANDIHEWKDFPKGLRVLLLDGDSNSASEIRTKLEAMDYIVSTFCDENEALSAISSKPEGFHVAIVEVCTSNIGSFKILEHAKDLPIIMASNTHCLSTMMKCVVLGAVEFLRKPLSEEKLRNIWQHVVHKAFNTGTSVLPKSLEPVKESVVLQLQTDGGEHESVNLKESRFSDDDREQSAGSDKYPAPSTPQLKHGARLMDHGDCQEQTNCSTEKESEDHDGESKFVETTCGVLNSEGTCKPVKPAKALNMEDENLANDSKSEKVVSRPVHDSVLSNTEVDTVSPNKSGVHSGSRQIKTKKKVDWTPQLHKKFVKAVEQLGVDQAIPSRILELMNVEGLTRHNVASHLQKYRMHRRQILPKEDRRWVQRPVMSFPPYYSNCTPSPSPVYPIWGQSGNQPAGMHAWGLPGYPLWHPTENWHWTPYHRIHADAWGCPVLPASQSPCISYSQNIPGWHNANSVNYSASKLQNSCEYHPAEDVVDKAVKEAISKPGLPMPLGLKPPSIDCVLSELSRQGISSIPTCSRHAKPELKPEPKPQGPPLGDQPVPL 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1753 551 Pfam Response regulator receiver domain 20 126 IPR001789 GO:0000160
Acco12g1753 551 MobiDBLite consensus disorder prediction 164 184 - -
Acco12g1753 551 Pfam Myb-like DNA-binding domain 306 355 IPR001005 -
Acco12g1753 551 NCBIfam myb-like DNA-binding domain, SHAQKYF class 303 357 IPR006447 GO:0003677
Acco12g1753 551 SUPERFAMILY CheY-like 16 133 IPR011006 -
Acco12g1753 551 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 524 IPR044825 GO:0003700|GO:0045893
Acco12g1753 551 Gene3D - 300 361 - -
Acco12g1753 551 SMART REC_2 18 127 IPR001789 GO:0000160
Acco12g1753 551 SUPERFAMILY Homeodomain-like 301 359 IPR009057 -
Acco12g1753 551 FunFam Two-component response regulator 299 362 - -
Acco12g1753 551 FunFam Two-component response regulator-like APRR2 17 142 - -
Acco12g1753 551 ProSiteProfiles Response regulatory domain profile. 19 131 IPR001789 GO:0000160
Acco12g1753 551 MobiDBLite consensus disorder prediction 158 227 - -
Acco12g1753 551 MobiDBLite consensus disorder prediction 536 551 - -
Acco12g1753 551 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 300 359 IPR017930 -
Acco12g1753 551 Gene3D - 18 139 - -
Acco12g1753 551 CDD REC_typeB_ARR-like 20 131 - -
Acco12g1753 551 MobiDBLite consensus disorder prediction 200 227 - -
Acco12g1753 551 MobiDBLite consensus disorder prediction 522 551 - -
Acco12g1753 551 MobiDBLite consensus disorder prediction 283 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1753 Acco-ChrAcco12 28702497 28706644 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1753 1 526 Response Regulator Gene Family AT4G18020 49.822 6.64e-139 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Acco12g1753 Response_reg 2.9e-07 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g1920 11 33481357 33486495 Acco12g1753 12 28702497 28706644 CCT