Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1742 ATGGCGACCTCTCTCTCTCATTTTCCTCAATCATCGTCTCCTTTAAACTCATGGCTTCCCCTTTCCGACGCCTATGTTAATAGGGCTGAGACAACCATGGCTCCAGCGGATCGAGCTCCGGCGGAGAGATTTATGCCTGTTGGGTACAGTTTTCATCCGACCGACCAAGAGCTCATCGGTCACTACCTCCGCCACAAATTGAAGGGTGACGATCTTTCGATTCACGACACCATCCCTGAGATTGGCGTCTGCAAGGGTGAACCCTGGGATTTATTAGATTGGGCTGCTTCCGCTTCAGCTGATGAATCACAATGCTTTTTCTTCAGTCCTCGCGACTATAATTACTTTAACAGAGCTGCCTTGCGTGGCTTCTGGAAAGTAACTGGTAGAGACCGTAAAATCACCAGTAAAGACACCAACAAAGTCATTGGGACCAAGAAGACCTGTTATGTCATTAACAGGCTCATCGCTGGCTCTGTTTTTCTCGTCGGAAAACAGAGAAAAACAATTGAGAGAGGGTGTCGGAGAGAGAGAACAAGAGCAAGGGAAACCGAAGCCAAACTACCCTGTTCTAACACCGTTGGGACAGAGTATAAAATCCAGCATCTTTATTAA 615 0.4732 MATSLSHFPQSSSPLNSWLPLSDAYVNRAETTMAPADRAPAERFMPVGYSFHPTDQELIGHYLRHKLKGDDLSIHDTIPEIGVCKGEPWDLLDWAASASADESQCFFFSPRDYNYFNRAALRGFWKVTGRDRKITSKDTNKVIGTKKTCYVINRLIAGSVFLVGKQRKTIERGCRRERTRARETEAKLPCSNTVGTEYKIQHLY 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1742 204 Gene3D NAC domain 54 183 IPR036093 GO:0003677|GO:0006355
Acco12g1742 204 ProSiteProfiles NAC domain profile. 45 204 IPR003441 GO:0003677|GO:0006355
Acco12g1742 204 Pfam No apical meristem (NAM) protein 46 149 IPR003441 GO:0003677|GO:0006355
Acco12g1742 204 SUPERFAMILY NAC domain 41 148 IPR036093 GO:0003677|GO:0006355
Acco12g1742 204 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 45 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1742 Acco-ChrAcco12 28638693 28647845 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1742 45 148 NAC Transcription Factor Family AT1G33060 50.459 3.70e-26 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco12g1742 NAM 2.4e-21 No_clan