Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1719 ATGAGCTGTTTCTTCTTCAAAAAGAAATCTAATAGAAGGGGAGAGGCGAACTCGGCGCCGGAATTGCAAAATGAGAGGCGCAGGGACAACCCGGCGGTGAACCGGGTGTGCAAGTCGACGAGTTCGATACCGTCGCCGAGGACCCTGACAGAGGTGTACAAAGAGAAAGCCAAGGAGAACGATTTCAGAGTTTTTAGTTTGCAAGAGCTTCTACAAGCTACGAATGGCTTCAGTAGGATGCTTAAGATCGGTGAAGGTGGCTTTGGGAGCGTGTATAAAGGTACGATTACGCCTCCCGGTGGACGAGGCGATCCGCTCGTCGTAGCCATAAAAAAGCTCAACAAGCATGGGTTTCAGGGTCACAAAGAATGGCTTGCTGAAGTTCAATTTCTTGGCGTTGTAAATCATCCGAATCTGGTAAAACTTCTGGGATACTGCTCAGTTGATAGCGAAAGAGGGATCCAACGGTTGTTGGTGTATGAGTATATGGCCAATAGAAGCCTAGAACCTCATCTTTTTAATCCTTCTCTTCCCACCTTGCGTTGGAAAACAAGATTGCAGATCATGATCGGTGCTGCCGAAGGATTGGCTTATTTACATGAAGGATTGGAATTTCAGGTGATATACCGAGATTTCAAAACTTCAAATGTTCTATTGGATGAGAACTTCCACCCAAAGCTCTCAGACTTTGGTCTTGCGAGGGAAGGCCCCCAAGGCGATAATACTCATGTATCCACTGCGGTGGTTGGAACACAAGGATACGCTGCCCCAGAGTATATAGACACGGGGCATCTCAAAGCTGAATGTGACATTTACAGTTTTGGAGTGGTACTGTATGAGGTGATCACAGGGAGGCGGGCATTAGACAGAAACCGTCCAGCTGCAGAACAAAGACTTCTAAATTGGGTTAAACAGTATCCTGCTGACACTGGCAGATTCAGCATGATCATTGACCCGCGTCTCAGGAACCATTTTTCTCCTGGCGCAGTTCGCAAAGTTGCCAAGTTGGCCGATGCCTGTATAAGTAAGAACCCTAAAGACAGGCCAACCATGGCTCAGATAGTGGAAAGCTTGAAGGAAGCATTGCAGGTTTCAGAGACCTCTAATACTTCTCAGAGCGCAACTCCTGAATCTTCTCGATCTGCTTTGGCTCGAAAAGGTAAATAA 1167 0.4704 MSCFFFKKKSNRRGEANSAPELQNERRRDNPAVNRVCKSTSSIPSPRTLTEVYKEKAKENDFRVFSLQELLQATNGFSRMLKIGEGGFGSVYKGTITPPGGRGDPLVVAIKKLNKHGFQGHKEWLAEVQFLGVVNHPNLVKLLGYCSVDSERGIQRLLVYEYMANRSLEPHLFNPSLPTLRWKTRLQIMIGAAEGLAYLHEGLEFQVIYRDFKTSNVLLDENFHPKLSDFGLAREGPQGDNTHVSTAVVGTQGYAAPEYIDTGHLKAECDIYSFGVVLYEVITGRRALDRNRPAAEQRLLNWVKQYPADTGRFSMIIDPRLRNHFSPGAVRKVAKLADACISKNPKDRPTMAQIVESLKEALQVSETSNTSQSATPESSRSALARKGK 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1719 388 MobiDBLite consensus disorder prediction 14 33 - -
Acco12g1719 388 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 163 373 - -
Acco12g1719 388 Gene3D Transferase(Phosphotransferase) domain 1 163 384 - -
Acco12g1719 388 CDD STKc_IRAK 83 360 - -
Acco12g1719 388 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Acco12g1719 388 Gene3D Phosphorylase Kinase; domain 1 49 162 - -
Acco12g1719 388 MobiDBLite consensus disorder prediction 363 380 - -
Acco12g1719 388 ProSitePatterns Protein kinases ATP-binding region signature. 83 112 IPR017441 GO:0005524
Acco12g1719 388 MobiDBLite consensus disorder prediction 363 388 - -
Acco12g1719 388 MobiDBLite consensus disorder prediction 14 42 - -
Acco12g1719 388 Pfam Protein kinase domain 79 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1719 388 SUPERFAMILY Protein kinase-like (PK-like) 57 358 IPR011009 -
Acco12g1719 388 ProSiteProfiles Protein kinase domain profile. 77 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1719 388 PANTHER OS01G0588500 PROTEIN-RELATED 37 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1719 Acco-ChrAcco12 28331822 28334077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1719 1 358 Glycoside Hydrolase AT3G07070 42.077 3.72e-92 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Acco12g1719 Pkinase 7.3e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g1897 11 33195272 33197089 Acco12g1719 12 28331822 28334077 CCT