Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1709 ATGATTTGTCAAAGAGAGGTTGAGCTGGTTTTGGACATGGAGGAAAGGTACGAGGCATTGAAGGATCTTGGTTCTGGGAATTTCGGAGTGGCTAGGTTGGTTAGGGATAAGAAGACTACAGAGCTCGCTGCTGTCAAATACATTGAAAGAGGGAAAAAGATTGATGAGAATGTTCAAAGGGAGATCATCAACCACCGATCTTTAAGGCATCCAAACATTATCAAGTTCAAAGAGGTCGTGCTGACGCCAACTCATTTGGCTATTGTCATGGAATATGCTGCCGGCGGTGAACTGTTTGAGAGGATATGCAGTGCCGGTCGATTCAGTGAAGATGAGGCAAGATTTTTCTTCCAGCAACTAATTTCTGGTGTTAGCTACTGTCATTCAATGGAGATTTGTCATAGAGATCTGAAGTTGGAGAACACTCTCTTGGATGGAAGTCCCAATCCTCGAGTTAAAATATGTGACTTCGGTTACTCAAAGTCTGCTTTACTTCATTCTCAACCAAAATCAACTGTAGGAACTCCGGCTTACATTGCTCCAGAGGTTCTCTCCCGTAAGGAGTATGATGGAAAGATTGCAGACGTCTGGTCCTGTGGTGTGACTCTGTATGTCATGTTAGTGGGAGCATACCCGTTTGAAGATCCTGAAGATCCTAGGAATTTCCGAAAGACAATTGGGAGAATAATGGGCGTCCAGTACAGCATACCCGACTACGTACGTATCTCTTCAGAATGTAGGCATCTTCTTTCTCGCATATTTGTTGCCAATCCCGCTAAGAGGATAAGCATACCGGAGATACAACAGCACCCATGGTTTCTGAAGAACTTGGCGAAAGAGACAGCGAAAGGGAAGGAGGAAGCAGAGAAAGAGGAAGGAAGGCAGAGTGTGGAAGAGATAATGAATATTATACAAGAGGCAAGAACTACTACAGTGGGGCAAGGATCCAACGGTGGAGGTCTACTTGGTGGCGGAGGGTCATTGGACAGTGGGGATCCTCTGGCTGATGAGGAATCTGAAGCTGATGTTAGTGGTGATTATTCTGAGAACTAG 1053 0.4511 MICQREVELVLDMEERYEALKDLGSGNFGVARLVRDKKTTELAAVKYIERGKKIDENVQREIINHRSLRHPNIIKFKEVVLTPTHLAIVMEYAAGGELFERICSAGRFSEDEARFFFQQLISGVSYCHSMEICHRDLKLENTLLDGSPNPRVKICDFGYSKSALLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIGRIMGVQYSIPDYVRISSECRHLLSRIFVANPAKRISIPEIQQHPWFLKNLAKETAKGKEEAEKEEGRQSVEEIMNIIQEARTTTVGQGSNGGGLLGGGGSLDSGDPLADEESEADVSGDYSEN 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1709 350 PANTHER SERINE/THREONINE KINASE 15 301 - -
Acco12g1709 350 Pfam Protein kinase domain 17 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1709 350 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Acco12g1709 350 FunFam Serine/threonine-protein kinase SRK2E 93 281 - -
Acco12g1709 350 SMART serkin_6 17 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1709 350 MobiDBLite consensus disorder prediction 308 350 - -
Acco12g1709 350 Gene3D Phosphorylase Kinase; domain 1 3 92 - -
Acco12g1709 350 Coils Coil 274 294 - -
Acco12g1709 350 FunFam Serine/threonine-protein kinase SRK2E 11 92 - -
Acco12g1709 350 CDD STKc_SnRK2 16 272 - -
Acco12g1709 350 Gene3D Transferase(Phosphotransferase) domain 1 93 281 - -
Acco12g1709 350 SUPERFAMILY Protein kinase-like (PK-like) 15 279 IPR011009 -
Acco12g1709 350 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Acco12g1709 350 MobiDBLite consensus disorder prediction 333 350 - -
Acco12g1709 350 ProSiteProfiles Protein kinase domain profile. 17 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1709 Acco-ChrAcco12 28215536 28218455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1709 16 277 CBL-interacting serine-threonine protein kinases AT5G25110 43.590 1.11e-67 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Acco12g1709 Pkinase 7e-72 CL0016