Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1707 ATGTCCTTGTCATCGGAGAACTCGGAGGTTTCTGACTTGAAACCGGTCAAGACCTCGGAGCAGTCTTCCTTCTCTCAGACTTGTAGCCTCTTGAGTCAGTACCTCAAGGAAAAAGGCAGCTTCGGAGATCTTTGTCTTGGAATGAAATGCAACATCAATCCAACTGGGTCTCCTGAGTCATCTTCTCACTCTGCAACAACGAAGAACCTTCTTCCATCCATGACTCTCGTGAATCCCGGTGTGGAGAATTCTGCGAGCAAGGAGCCTAAATCTGCACAGTTGACAATTTTTTATGGGGGACAAGTCCTTGTGTTTGATGATTTTCCAGCTGAGAAAGCCAAGGAGATCATGTCCCTTGCAGGCAAAGGAATCTGCCCACAAACTCAGAACAGATCTGCTTATACTTTTCCTTCATTTTCTCCTAATTTGGTCACAATTTCTGCTGATTCTAATGCTGCCTGCAATTTGGTTCATGAACACTCTCAAGCACAACCCAGACCTGTTATTGCTGATCTTCCAATTGCTAGGAAAGCTTCACTTCATCGGTTCTTGGAGAAGAGAAAGGATAGAATTGCTGCCAGAGCTCCATATCAAACGAACAATGCCAAGAAGCCAGCTGAAGGCATGCCATGGATGGGCTTATCTCCTAATTCACCACAAGTCTGA 666 0.4535 MSLSSENSEVSDLKPVKTSEQSSFSQTCSLLSQYLKEKGSFGDLCLGMKCNINPTGSPESSSHSATTKNLLPSMTLVNPGVENSASKEPKSAQLTIFYGGQVLVFDDFPAEKAKEIMSLAGKGICPQTQNRSAYTFPSFSPNLVTISADSNAACNLVHEHSQAQPRPVIADLPIARKASLHRFLEKRKDRIAARAPYQTNNAKKPAEGMPWMGLSPNSPQV 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1707 221 MobiDBLite consensus disorder prediction 1 21 - -
Acco12g1707 221 MobiDBLite consensus disorder prediction 199 221 - -
Acco12g1707 221 ProSiteProfiles Tify domain profile. 87 122 IPR010399 -
Acco12g1707 221 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 15 204 IPR040390 -
Acco12g1707 221 Pfam Jas motif 173 198 IPR018467 -
Acco12g1707 221 Pfam tify domain 88 121 IPR010399 -
Acco12g1707 221 SMART tify_2 87 122 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1707 Acco-ChrAcco12 28207736 28209285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1707 18 215 Tify Gene Family AT1G19180 40.167 6.12e-43 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Acco12g1707 tify 1.6e-20 No_clan