Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1704 ATGGTTAAGCAAGGACCTTGCTATCACTGTGGAGTTACAAACACACCACTTTGGCGCAATGGGCCGCCAGAGAAGCCAGTGCTATGCAATGCATGTGGATCTCGATGGAGAACAAAGGGAACCCTAGCAAATTATACCCCTTTACATGCTCGGACTGAAACCGATGATTATGAGGATCCAAGGCTTTCCAGGGCAAAGAACATAACATTAAATAAGAACAAAGAAGTGAAATTCCTCAAAAGAAAGCAGTACCATGATAATTTTGTATCTGGTTGGGTTGCCCCTGATTACAACCAAGGATCTCTAAAGGTTATTGATGAAGATGCAAGCAATAGATCAAGTTCAGGATCAGCTGGCTCTAACTCAGAGAGCTGTGCTCAATTTGCTGGAACAGATGCTAGTGACCTGACAGGTCCTGCTCAGTCAGTGGTAGGGGGTGGTATGGTGCCCTCAAGAAAGAGAACCTGTGTGAACCGTCAAAAGCCATCTTCTGTTGAGAAGCTCACAAAAGATTTATATACTATCCTTAATGAACAGCAGTCCTATTTCTCTGCATCTTCTGAAGAGGATCTAATTTTTGACAGTAAAACACCAATGGTCTCTGTTGAAATTGGACATGGAAGTGTTCTCATTAGGCATCCTAGCTCTATAGCCCGTGAAGAAGAATCTGAGGCTAGCTCCCTTTCAGTTGATAACAAACAATGCCCAACAAGCGAGGCATATTCGTGCTCTGGTGCTGTTGATACGCATAATGATTTCACTGGCATGAACTTTTCATCTCATGGAGTTGAAAATATCAACTACTCTGCTAGCCAAGGAATTCAGAGGGAGAAACTTAAAAGGGAGCCTGAAACTTCACAAATCCTTGGATATCATGATTCACCATTGTGCCTGATAGATTTAGTTGATGTTGTAAACTATGAGGTGTTCTTGACGAAATTGACAAATGAGGAGCAGCAAAAATTACTTGAGCGTCTCCCTGCCGTTGATACTGCTAAACTTCCTGACAGCCTTAAAAGCATGTTCAACAGCTCTCAGTTCAGAAAGAACTTAACTTACTTTCAAGAGCTTCTTAGGGAAGGTGTCTTTGATACCTCTTCATCAGTGGCAAATGCTGGAGATTGCCAGGCTTTGCAACAGCTTGCATTATATGATTTTTCACAGTCAAAATGGGTGGAACAATATGATGTACTTAAGAAATGTAAATATGGAGAAGAAAAATCTGTTGCTCTTGGATGTACTGGCTCTGCATCCAGTAATGCTGCAAATGAGAAGAGTTCGCGTGACAGCTCAAAACAAAGTTTTCCTGCACTGAACTCAACATTTAGGAGCCCCAAAAGAGTGGTGATGGTGAAGGCTGGTAGTGAGGGCACGGAAGTCTTTGAAGATGGCTCTGGCTTCAGTCCAAATGGCTTATTGGCTTTGCCCTCTGATGGCAGCCCACATATGCTGGATCCTTTACACTTTGTCGACGAGAGTTCTGATCAAGATCTTCTGCTCGAAGTGCGATCTAACAGTTCTTTCCCGGAAGCAGAACTGCTGTTTCCAGCCTTAAGATTTGGTACTCAGCTCAGCACTAGCAGCTATGGCCATTACTGA 1599 0.4315 MVKQGPCYHCGVTNTPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARTETDDYEDPRLSRAKNITLNKNKEVKFLKRKQYHDNFVSGWVAPDYNQGSLKVIDEDASNRSSSGSAGSNSESCAQFAGTDASDLTGPAQSVVGGGMVPSRKRTCVNRQKPSSVEKLTKDLYTILNEQQSYFSASSEEDLIFDSKTPMVSVEIGHGSVLIRHPSSIAREEESEASSLSVDNKQCPTSEAYSCSGAVDTHNDFTGMNFSSHGVENINYSASQGIQREKLKREPETSQILGYHDSPLCLIDLVDVVNYEVFLTKLTNEEQQKLLERLPAVDTAKLPDSLKSMFNSSQFRKNLTYFQELLREGVFDTSSSVANAGDCQALQQLALYDFSQSKWVEQYDVLKKCKYGEEKSVALGCTGSASSNAANEKSSRDSSKQSFPALNSTFRSPKRVVMVKAGSEGTEVFEDGSGFSPNGLLALPSDGSPHMLDPLHFVDESSDQDLLLEVRSNSSFPEAELLFPALRFGTQLSTSSYGHY 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1704 532 Pfam Asx homology domain 276 366 IPR028020 -
Acco12g1704 532 ProSiteProfiles GATA-type zinc finger domain profile. 7 40 IPR000679 GO:0006355|GO:0043565
Acco12g1704 532 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 45 - -
Acco12g1704 532 ProSitePatterns GATA-type zinc finger domain. 7 32 IPR000679 GO:0006355|GO:0043565
Acco12g1704 532 CDD ZnF_GATA 6 53 IPR000679 GO:0006355|GO:0043565
Acco12g1704 532 Gene3D - 293 388 IPR038108 -
Acco12g1704 532 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 292 401 IPR044867 -
Acco12g1704 532 MobiDBLite consensus disorder prediction 108 132 - -
Acco12g1704 532 Gene3D - 3 83 IPR013088 GO:0006355|GO:0008270
Acco12g1704 532 MobiDBLite consensus disorder prediction 414 438 - -
Acco12g1704 532 SMART GATA_3 1 53 IPR000679 GO:0006355|GO:0043565
Acco12g1704 532 Pfam GATA zinc finger 7 41 IPR000679 GO:0006355|GO:0043565
Acco12g1704 532 PANTHER OSJNBB0038F03.10 PROTEIN 7 520 IPR044589 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1704 Acco-ChrAcco12 28144227 28149313 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1704 1 514 C2C2-Gata Transcription Factor Family AT4G17570 50.474 3.57e-137 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Acco12g1704 ASXH 2.2e-11 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g1855 11 32882342 32888034 Acco12g1704 12 28144227 28149313 CCT