Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1702 ATGGGATCTCTCATCGCCGGCAATGCTCCCGACGCTTCGATCTCCTCCGAGGCCGAAATGGCCTGGCACCTTGCGTCTCTTCTTCTATCACTCGGTAGTCCAACTCATCCCGCCGACCTTGCTTCTCGATGCACTTTATTCACTGCTTCTCCTGAGCTAGTTGAGTTGCTCTGCTCGATCCCCAAATCTCCCATCTTGTTGACCTCCGATTTCTATGTCACTCTATCTGCTGTTGCTATAGTCGCTGTTGGACGCTTCGTCTCCGTAACCGATTTTTTTGGTAGTTTTTTTATACCTAGATTTGGAATCAGAGTTTCCTCGAGGGAAGGTTGGGGGAATAGCTGTAGAAAACGGAAACGAAGGTTTATTTTAGAGTCCGATTGTCTTCCTGTGGCGAAAAGAGGGATAACTTATTATTCTGAACATGTAAATGAGTTGGATCCAATGAAGTTGCTTCCTCCGAATAGAATCAATGATGATTCTTCACGGATTATTTTACCGTCACATGGTACTACAAGCATTGAAATATTTGAAAGTCCAGATCAGTACAACGAAGTTAATATGAAGGAGAATTCCCGAAGTGGGACAAATGCCAATGACGCATTAAAACATCTTAAATCTACCAACATGCCTCCGTTGGTTGATGACAAGATTAATGAGAATAGAGTAGCACCAAACATTAGAATAGGTGATAGCATGAAACCTCTTCAAAACATGGCGCAGCCATCAAATACTTCTGTGTTAGAAATGCCGCCCAAAGGTGACACTGAAAGGATTCATGATGAAAACTGTGATGAAGATAACCATTTGAATGGAAAGACAATAGCTGCAGATATGAAAAGTATGGTCTTGTTTACGGGTCCCCTTTCTTTGCACAAGTTTCCTCAATCCTCTTTGAAAACGAATGCCATGCCCAGCGATGCAACTGTTCCTAATCTGCAAAACATGTCCAAAAGTTTTCATAATGAAGAAAAACGGAACTTTAGTAGAGGTCAGGCTTCAATGGGTAAGGGACAAAAAAAGAATTGCGCTGCCATGCATATCAAGGAAAAAAGGGGGACTATGGTCTCAACGTGTCGTGAGGATCAAAAGGAGCGTAAAGAGCTTCCTACGTTTGAATCGTACACTGTAGAAGAGGAAGAAGGCTCAGGTGCTTATGGCACTGTTTACAAGGCAAGGAGGAAGAATGATGGAGCCACGGTTGCCATTAAATGTCCTCATGCTAAAGCTCACGTGCAATATGTTATTAATGAGCTAAAAGTGCTGGAGCGATTTGGAGGCAAAAACTTTATCATTAAATACGAAGGCAGCTTCAAGAATGGAAATTCTGATTGCTTTGTTCTAGAACATGTTGAGCACGACAGGCCTGAGGTGTTAAGGAGAGAAATTGACATTGTTCAACTCCGATGGTATGGTTACTGCATGTTCAAGGCTCTTGCAGCTCTTCACAAGCGGGGAGTAATACACAGAGATGTTAAACCTGGCAATTTCCTTTTCTCCCGTAAGCTTAACAAGGGTTTCCTCATTGATTTCAATCTTGCCAAGGATTTGCATCAGAAGCCAGGGAATTCCACTTCAACCAAATGCAGAAAGATCCCAAATGTCAATTTTTTGGAAGCTGCCAATCAACAGACAACTAATGCCTCCAAGTCGATTTTAGATCCTAAGGACAACAGAAGAAAGACTGTGGTGCAGTCAAAGACTAAAAATGACCGAGGTAGTGGACAGGTAATGAAAAGCCAAGGTGCGGACGGCTCAGGAGTAACTTCAGCAAAGGATGTGACCAGCGCTAGAACATCACTTGAAAGGAGACTGAGTCTGGTAAAGCCAAGGAGAAAAGAGTTGATTAACATCTTGCAAGAAACGTGGTTAGCTCCAAATCAAGAACCATCAAATACTCGTATGAGAAAGCGAGTTCCTGCTCCTCGTAATAAGATGGAGAGCGAGCATGTCTACATTTCTCCCATGCCTTTGAACTCAATTGCCAATGATGCCACTGATGCTGAACTTCTGAAGAGTAAAGGGAATGGAAAGCAGATAAGAGAAGGTTCTTGTGTGGGAACAAAAGGCTTTCGGGCTCCAGAGGTATTGTTCAGGTCTCCACATCAAGGTCCCAAGCTTGACATATGGTCTGCCGGTGTATCCTTGCTCTATCTCATAATTGGGAAAGCTCCTTTCACTGGTGATCCTGAACAGAACATAAAGGATATAGCTAAACTGAGAGGCAGTGAGGATCTATGGGAGGTTGCTAAGCTACACAATCGCGAATCCTCATTCCCTGCGGACTTGTACGATAGACAAAGTTTACCATCTTTGCAACTTCGAGATTGGTGCACAATGAACTCCAAGAGACCAGATTTCCTAGAAGTAATTCCAGGTTCACTGTTTGATCTTTTGGACAAGTGCTTAATTGTGAACCCAAGATTGAGAATCAGTGCAGAGGAAGCTCTTCAGCATGAGTTTTTCGCTCCATGCCATGAGATCCTGAGGAAGGAGAGGCAATGTAAGAAGGAATTATTGAGTTGA 2526 0.4319 MGSLIAGNAPDASISSEAEMAWHLASLLLSLGSPTHPADLASRCTLFTASPELVELLCSIPKSPILLTSDFYVTLSAVAIVAVGRFVSVTDFFGSFFIPRFGIRVSSREGWGNSCRKRKRRFILESDCLPVAKRGITYYSEHVNELDPMKLLPPNRINDDSSRIILPSHGTTSIEIFESPDQYNEVNMKENSRSGTNANDALKHLKSTNMPPLVDDKINENRVAPNIRIGDSMKPLQNMAQPSNTSVLEMPPKGDTERIHDENCDEDNHLNGKTIAADMKSMVLFTGPLSLHKFPQSSLKTNAMPSDATVPNLQNMSKSFHNEEKRNFSRGQASMGKGQKKNCAAMHIKEKRGTMVSTCREDQKERKELPTFESYTVEEEEGSGAYGTVYKARRKNDGATVAIKCPHAKAHVQYVINELKVLERFGGKNFIIKYEGSFKNGNSDCFVLEHVEHDRPEVLRREIDIVQLRWYGYCMFKALAALHKRGVIHRDVKPGNFLFSRKLNKGFLIDFNLAKDLHQKPGNSTSTKCRKIPNVNFLEAANQQTTNASKSILDPKDNRRKTVVQSKTKNDRGSGQVMKSQGADGSGVTSAKDVTSARTSLERRLSLVKPRRKELINILQETWLAPNQEPSNTRMRKRVPAPRNKMESEHVYISPMPLNSIANDATDAELLKSKGNGKQIREGSCVGTKGFRAPEVLFRSPHQGPKLDIWSAGVSLLYLIIGKAPFTGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPADLYDRQSLPSLQLRDWCTMNSKRPDFLEVIPGSLFDLLDKCLIVNPRLRISAEEALQHEFFAPCHEILRKERQCKKELLS 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1702 841 Pfam Protein kinase domain 683 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1702 841 Pfam Protein kinase domain 375 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1702 841 FunFam Probable serine/threonine-protein kinase DDB_G0291918 367 532 - -
Acco12g1702 841 Gene3D Transferase(Phosphotransferase) domain 1 347 536 - -
Acco12g1702 841 MobiDBLite consensus disorder prediction 568 600 - -
Acco12g1702 841 MobiDBLite consensus disorder prediction 546 600 - -
Acco12g1702 841 FunFam Kinase like protein 661 833 - -
Acco12g1702 841 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Acco12g1702 841 Gene3D Transferase(Phosphotransferase) domain 1 661 840 - -
Acco12g1702 841 SUPERFAMILY Protein kinase-like (PK-like) 372 828 IPR011009 -
Acco12g1702 841 SMART serkin_6 375 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1702 841 MobiDBLite consensus disorder prediction 553 567 - -
Acco12g1702 841 PANTHER OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED 341 836 - -
Acco12g1702 841 ProSiteProfiles Protein kinase domain profile. 375 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1702 Acco-ChrAcco12 28106952 28112412 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1702 375 527 MAP Kinase Kinase Kinase AT3G13530 32.749 1.01e-11 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-2 Acco12g1702 Pkinase 3.1e-17 CL0016