Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1690 ATGTCACCTTTTTTAACTTTGATCCAGATTCATGAACCTAATATCCTATATATACGCACAGCCTCTTCCTCTTCTAATTTCAGACTTCGAATATTCAATTTCCTTCTTAATCTTCCTCCTCTCTCTTTTTCTTTCTTCTTTGTTTGTAGAACCGCCGGAGATACCAGAATCTCTCTCGCCGGAGGAGGATATTGCGGTGGTGACGATATGTACGGGGAGGCCGCTTTTGGGTCTGATATAGCTTTGGAGTCAATTCGACTTCACTTGCTCGGTGACTTTGGGACTGCTTTTGCGGATTCCGATACTTCTTCGGGTCCCGCTCCGGTTTACACTCGGAGCTCCAGTCTCAGCAGCTTGCACTCGTGTCTGACCGCCAATTGGGGCGAATTGCCGCTCAAGGAGGACGATTCCGAAGACATGCTGGTTTACGGCGCCCTCCGTGACGCCGTCAACTTCGGATGGGTCCCTTCCCTCGATGTCGGGTCGCCCGAGAGCATTTCTTCTGGTTTCGCCCCGACCGTTGAAGTGAAATCGGAGCCGGATGTTTTGCCGGGTTTGGATTCCCCGTCGGGCTCTCCCGTGGTAAAGCAAGAGAAGGTGGTTGAAGCAGCCGTGCCGGCAGCAGTTCCGTCGAAGGGCAAGCATTACCGGGGGGTAAGACAACGGCCGTGGGGGAAATTCGCGGCGGAGATCCGTGACCCGGCAAAGAACGGGGCTAGGGTTTGGCTCGGAACATTCGAGACAGCTGAAGACGCAGCTTTGGCTTACGATCGAGCCGCGTACAGGATGCGAGGCTCGCGGGCTCTGCTTAATTTTCCACTGAGAGTGAACTCAGGCGAGCCCGACCCGGTGAGAGTGACATCGAAGAGGTCATCGCCGGATAGATCGATTTCTTCTTCGTCATCGTCGAAGAGCGGGGCGTCGCCGAAGAGGAGGAAGAAGGCGGAGGTGGTGGTGGGGACAGGCTCAAAGGCGACTGGGCAAGTGGGAAGCCAAGTGGGAACGCCGACGTTGTTGGTTAGCTAA 1026 0.5468 MSPFLTLIQIHEPNILYIRTASSSSNFRLRIFNFLLNLPPLSFSFFFVCRTAGDTRISLAGGGYCGGDDMYGEAAFGSDIALESIRLHLLGDFGTAFADSDTSSGPAPVYTRSSSLSSLHSCLTANWGELPLKEDDSEDMLVYGALRDAVNFGWVPSLDVGSPESISSGFAPTVEVKSEPDVLPGLDSPSGSPVVKQEKVVEAAVPAAVPSKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPDPVRVTSKRSSPDRSISSSSSSKSGASPKRRKKAEVVVGTGSKATGQVGSQVGTPTLLVS 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1690 341 MobiDBLite consensus disorder prediction 290 306 - -
Acco12g1690 341 MobiDBLite consensus disorder prediction 324 341 - -
Acco12g1690 341 MobiDBLite consensus disorder prediction 278 341 - -
Acco12g1690 341 PRINTS Ethylene responsive element binding protein signature 239 255 IPR001471 GO:0003700|GO:0006355
Acco12g1690 341 PRINTS Ethylene responsive element binding protein signature 216 227 IPR001471 GO:0003700|GO:0006355
Acco12g1690 341 Gene3D AP2/ERF domain 214 276 IPR036955 GO:0003700|GO:0006355
Acco12g1690 341 Pfam AP2 domain 215 265 IPR001471 GO:0003700|GO:0006355
Acco12g1690 341 SUPERFAMILY DNA-binding domain 215 275 IPR016177 GO:0003677
Acco12g1690 341 PANTHER DNA-BINDING DOMAIN 198 306 IPR044808 GO:0003700|GO:0009873
Acco12g1690 341 SMART rav1_2 215 279 IPR001471 GO:0003700|GO:0006355
Acco12g1690 341 CDD AP2 214 273 IPR001471 GO:0003700|GO:0006355
Acco12g1690 341 ProSiteProfiles AP2/ERF domain profile. 215 273 IPR001471 GO:0003700|GO:0006355
Acco12g1690 341 FunFam Ethylene-responsive transcription factor 2 214 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1690 Acco-ChrAcco12 27904425 27905450 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1690 78 315 AP2-EREBP Transcription Factor Family AT4G17500 59.200 3.71e-77 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco12g1690 AP2 1.6e-14 CL0081