Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1689 ATGGCAAATCCTGTTGAACTTTCAGCTCTCAATCGTATAAAATTGCATCTTCTAGGTGAACTGTCTCCTGTTGCCACTCTCTCCAGTGGCCTTAGCAGTTCAGCGAGCGATGCTAACCAACAATTCTGGTTTGGTGAATCAAACGGAGCAATTTCCACTTCTGATTCTGACTCTCTCTGTACCCAATCATCGAGGTCTGACTCTTCCATAACTGTGTCTGATTACCTCCCTGAACTATTCGAATTCCCATCCAACTCTACTAATCTATCCGAGTTCGAGTTCAAGAACGAAGTAATTGACCTCTCAACGCCCAGAATCGAGGCCGAAACTTTACAATTTGACGCCCATTTTTCCCAATTCGAAGCAAACTCACGGGCAGCATCAAGCTCTGGCTCACAGTCCAGCAGTTGCATGTTCGAGTTTCAAAGAATACCCCAGAGCGTCGAGAAGAAATTTCATATGAATCGGAAACCATCCTTGCAAATTACGCTACCCAAAAAAACCGAGTGGATCCAATTTGGAAACTCGGATCTACAACATGAGATTTCAGATGTGTTCGTGCAGAATAATTCAAACCTTGAAGAGAAAAAACACTACAGAGGCGTTCGACATAGACCGTGGGGCAAGTTCGCAGCCGAGATTCGAGATCCAAACAAACGTGGATCTAGGGTTTGGCTCGGAACGTTCGACACGGCGATAGAAGCAGCAAAAGCGTATGATCGAGCTGCGTTTAAGCTTCGAGGCTCCAAAGCTATACTCAATTTCCCTCTGGAAGCAGGGACCTCCGGTTCGACCGACGGCACGGAGGAGAAAAAACGCCGGCGAGAAGATGATGAGGTGGAGACGGAAATGGATGTGAAACCAGTGGTGAAGAAAGAGAGAACGGAGGAATCTGACGTACGAAGGATAAGGGATACACCGTTAACGCCGTCAATGTGGACGGGGTTATTGGAGAATGATTTGAAGGACATTTTAACAGTTCCGCCTTTATCACCGTTATCTCCTCATCCGCCAATGGGCTTTCCTCAGCTAATGGTTGTATGA 1044 0.4655 MANPVELSALNRIKLHLLGELSPVATLSSGLSSSASDANQQFWFGESNGAISTSDSDSLCTQSSRSDSSITVSDYLPELFEFPSNSTNLSEFEFKNEVIDLSTPRIEAETLQFDAHFSQFEANSRAASSSGSQSSSCMFEFQRIPQSVEKKFHMNRKPSLQITLPKKTEWIQFGNSDLQHEISDVFVQNNSNLEEKKHYRGVRHRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAAKAYDRAAFKLRGSKAILNFPLEAGTSGSTDGTEEKKRRREDDEVETEMDVKPVVKKERTEESDVRRIRDTPLTPSMWTGLLENDLKDILTVPPLSPLSPHPPMGFPQLMVV 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1689 347 PRINTS Ethylene responsive element binding protein signature 238 258 IPR001471 GO:0003700|GO:0006355
Acco12g1689 347 PRINTS Ethylene responsive element binding protein signature 199 210 IPR001471 GO:0003700|GO:0006355
Acco12g1689 347 CDD AP2 197 256 IPR001471 GO:0003700|GO:0006355
Acco12g1689 347 MobiDBLite consensus disorder prediction 257 285 - -
Acco12g1689 347 ProSiteProfiles AP2/ERF domain profile. 198 256 IPR001471 GO:0003700|GO:0006355
Acco12g1689 347 Pfam AP2 domain 198 248 IPR001471 GO:0003700|GO:0006355
Acco12g1689 347 PANTHER DNA-BINDING DOMAIN 136 274 IPR044808 GO:0003700|GO:0009873
Acco12g1689 347 SMART rav1_2 198 262 IPR001471 GO:0003700|GO:0006355
Acco12g1689 347 Gene3D AP2/ERF domain 197 258 IPR036955 GO:0003700|GO:0006355
Acco12g1689 347 MobiDBLite consensus disorder prediction 265 285 - -
Acco12g1689 347 FunFam Ethylene-responsive transcription factor 2 197 258 - -
Acco12g1689 347 SUPERFAMILY DNA-binding domain 198 257 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1689 Acco-ChrAcco12 27891780 27892823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1689 1 347 AP2-EREBP Transcription Factor Family AT5G47230 45.115 5.59e-70 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco12g1689 AP2 5.6e-15 CL0081