Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1684 ATGAAGGGCGAAGAGGGGAAGAATGGAGAAGAAGAGAAATTATATTTTGGGGATTGCGATACCGGAAGAACCAGCTTAGTTGTGAGTGATGCGAAAAGGGTACTTGTTGGAGCAGGGGCTCGGGCACTCTTCTATCCCACTCTGCTTTACAATGTTCTTAGAAATAGGTTTCAGGCTGAGTTTCGATGGTGGGATAAAGTTGATGAGTTCATATTATTAGGTGCTGTTCCATTTCCTATTGATGTTCCCCGCTTAAAGGAGCTTGGCGTTTGTGGAGTCATCACATTGAATGAGTCATATGAGACTTTGGTTCCAGCCCCACTATATCATGCTTATGGAATTGATAATTTGGTTATTCCTACCAGAGATTATTGTTTTGCACCATCATTACACGACATATGCCGTGCTGTGGACTTCCTCCATGAAAATGCGTCAAGTGGGAGAAGTACATATGTGCACTGCAAAGCTGGGCGTGGTCGCAGCACAACTATTGTTATCTGTTACTTGGTACATTACAAGATGATGACGCCTGATGCTGCATACGATTATTTAAAGTCAATTCGGCCAAGAGTCCTACTAGCTTCTTCTCAGTGGCAAGCTGTTGAGGAATACTACCAGCTTATGGTGAAGAAGACAATGTTGTACAGTCCCACAGTAGCAGCAATAGATGGTATGGTAAAGTTTGACGATGAGGGGTCAGTGGTAGTGACACAAGTAGATTTTCAAGGGTACGAGGCAAGTATGGAGTCAGGATCAGGTGGTGTGTGGGGAGATGTAAGTTTGGTGTACCAGGCTGCACTAGCAAGAATCTCATGGCTCACGCTTCCATATCTCTCACAACCAAAGAAAATGAAGCCCCAGTCTTGGTTATTTTGGTAA 879 0.4403 MKGEEGKNGEEEKLYFGDCDTGRTSLVVSDAKRVLVGAGARALFYPTLLYNVLRNRFQAEFRWWDKVDEFILLGAVPFPIDVPRLKELGVCGVITLNESYETLVPAPLYHAYGIDNLVIPTRDYCFAPSLHDICRAVDFLHENASSGRSTYVHCKAGRGRSTTIVICYLVHYKMMTPDAAYDYLKSIRPRVLLASSQWQAVEEYYQLMVKKTMLYSPTVAAIDGMVKFDDEGSVVVTQVDFQGYEASMESGSGGVWGDVSLVYQAALARISWLTLPYLSQPKKMKPQSWLFW 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1684 292 SMART ptp_7 105 216 IPR003595 -
Acco12g1684 292 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 14 275 - -
Acco12g1684 292 ProSiteProfiles Dual specificity protein phosphatase domain profile. 63 210 IPR020422 GO:0006470|GO:0008138
Acco12g1684 292 CDD PTPMT1 63 206 IPR044596 GO:0004721
Acco12g1684 292 Gene3D Protein tyrosine phosphatase superfamily 63 213 IPR029021 -
Acco12g1684 292 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 56 210 IPR029021 -
Acco12g1684 292 Pfam Dual specificity phosphatase, catalytic domain 107 206 IPR000340 GO:0008138|GO:0016311
Acco12g1684 292 FunFam Dual specificity phosphatase domain protein 63 210 - -
Acco12g1684 292 SMART dsp_5 66 207 IPR020422 GO:0006470|GO:0008138
Acco12g1684 292 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 131 199 IPR000387 GO:0016311|GO:0016791
Acco12g1684 292 ProSitePatterns Tyrosine specific protein phosphatases active site. 152 162 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1684 Acco-ChrAcco12 27860358 27862605 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1684 22 275 Protein tyrosine phosphatase (PTP) family AT2G35680 59.717 4.15e-111 323