Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco12g1674 | ATGACTAGGCGGTGCTCTCACTGCAGCCATAATGGCCACAATTCCAGGACCTGTCCCAACCGTGGAGTTAAGCTATTCGGAGTCCGATTGACTGATGGGTCAATCCGGAAGAGTGCTAGTATGGGCAATCTTAGCCACTACGCCGGTTCGAGTTCAGGGCCTCATCAGACTGGGTCTAACACTCCGGGTTCTCCCGGCGACACACCTGATCACGGTGCGGCCGCAGACGGATACGCATCCGAGGATTTTGTACCTGGGTCGTCCTCAAGTTCACGTGAAAGGAAAAAAGGTGTTCCATGGACTGAGGAGGAACATAGAATGTTTCTACTTGGATTGCAGAAGCTAGGAAAAGGTGATTGGCGTGGAATTGCACGAAATTTTGTTATTTCAAGGACACCTACTCAAGTAGCCAGCCATGCTCAGAAATATTTCATTAGGCAAAGCAATGTGTCTAGGCGAAAAAGACGGTCCAGCTTGTTTGATATTGCTGCAGATGAACCAGCCGACATGCCCATGTTACCACAAGACCTCCAGTCAGCTAACGAGCCACCTGCTGAAGCAGAATGCAATAACAACCCTTTGCCTGATCCTCCAGCCCTTGATGAAGAATGTGAGTCCATGGATTCCACCAATTCAAATGATGGAGAGTCTGCCTCTATGAAGACAGATAGCACACAGTCACAAGCACAATCATCGTACCCAGTGGTATATCCTGCATACTTCTCTCCGGTCTTCCCTTTCCCAATGCCCTATTGGTCGGGATACATGCCAGAGCCCAGTAAGAAGGAGGAGACACATGAGGTGCTGAAGCCTACTGCTGTGCATTCTAAGAGCCCAATCAATGTTGATGAACTGGTGGGTATGTCTAAACTGAGTTTAGGAGACTCTATTGGTGACTCTGGTCCTTCCTCTCTGTCACTGAACCTCCGTCAAGGACCACCGAGGCAGTCAGCTTTTCATGCAACCCCAGCATGTGGGAATTCTGATGTGAATGGCAGTGTGATCCATGCGCTTTAA | 1017 | 0.4936 | MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMGNLSHYAGSSSGPHQTGSNTPGSPGDTPDHGAAADGYASEDFVPGSSSSSRERKKGVPWTEEEHRMFLLGLQKLGKGDWRGIARNFVISRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDIAADEPADMPMLPQDLQSANEPPAEAECNNNPLPDPPALDEECESMDSTNSNDGESASMKTDSTQSQAQSSYPVVYPAYFSPVFPFPMPYWSGYMPEPSKKEETHEVLKPTAVHSKSPINVDELVGMSKLSLGDSIGDSGPSSLSLNLRQGPPRQSAFHATPACGNSDVNGSVIHAL | 338 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco12g1674 | 338 | MobiDBLite | consensus disorder prediction | 164 | 228 | - | - | |
| Acco12g1674 | 338 | MobiDBLite | consensus disorder prediction | 297 | 324 | - | - | |
| Acco12g1674 | 338 | SMART | sant | 96 | 146 | IPR001005 | - | |
| Acco12g1674 | 338 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 95 | 147 | IPR006447 | GO:0003677 | |
| Acco12g1674 | 338 | ProSiteProfiles | Myb-like domain profile. | 92 | 144 | IPR001005 | - | |
| Acco12g1674 | 338 | PANTHER | TRANSCRIPTION FACTOR KUA1 | 3 | 277 | - | - | |
| Acco12g1674 | 338 | MobiDBLite | consensus disorder prediction | 41 | 101 | - | - | |
| Acco12g1674 | 338 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
| Acco12g1674 | 338 | CDD | SANT | 99 | 144 | IPR001005 | - | |
| Acco12g1674 | 338 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 92 | 148 | IPR017930 | - | |
| Acco12g1674 | 338 | MobiDBLite | consensus disorder prediction | 41 | 66 | - | - | |
| Acco12g1674 | 338 | Pfam | Myb-like DNA-binding domain | 99 | 144 | IPR001005 | - | |
| Acco12g1674 | 338 | MobiDBLite | consensus disorder prediction | 210 | 228 | - | - | |
| Acco12g1674 | 338 | SUPERFAMILY | Homeodomain-like | 94 | 149 | IPR009057 | - | |
| Acco12g1674 | 338 | Gene3D | - | 98 | 150 | - | - | |
| Acco12g1674 | 338 | ProSiteProfiles | SANT domain profile. | 100 | 148 | IPR017884 | - | |
| Acco12g1674 | 338 | FunFam | transcription factor MYB1R1 | 98 | 149 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Acco12g1674 | Acco-ChrAcco12 | 27687247 | 27690310 | Dispersed/Wgd |
Transcription factors information