Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1672 ATGGAAGCAGAACAACAAGAACCAGAAGCTCTCCTTCACTCTCAACTTCAACCCACCACTCCCTCTTCTCCTTCCTTCTCCAGCACCGAGGCTCAAGAAGCTCATCACAAAGAAGAGAAGGTGAAGAAGAAGAAGAGTATTATGAAGAAGACCAGCTGTAACAAGAACACAGACATGGTGGACGGGAAGCATCCAACGTACAGAGGCGTACGTATGCGTCAATGGGGCAAATGGGTTTCCGAAATCAGGGAACCCAAAAAGAAATCCAGAATATGGCTCGGAACTTTTCCTACCGCGGAAATGGCCGCTCGAGCTCACGATGTCGCTGTCCTCAGCATTAAAGGCACCTCCGCTTTCCTCAACTTCCCGGAGCTCGCCGCCGTACTTCCTCGTCCGGTCAGTAACTCCCCAAAGGACATCCAAGCCGCCGCCGCCAAAGCAGCTGCCATCAATTACCAAATCAACCCTCAAGGACGACCCGAACCCGACTCCGAGGTCATGCAGGCCGACGCTCCGGAACTGTCAAGTTCGCCGTCAACTGACGACGATGACACCTTCTTCAACCTCCCTGATATCTTAAATCACGGTGGCTCCGACGAGTTTCATTACTCCTCGTTGTGGCTCTTAGCCGGCGCCGATTACAGAGACTCAGGTTTCCGACTCGAAGAGCCATTTTTATGGGACTCTTATTAG 693 0.5209 MEAEQQEPEALLHSQLQPTTPSSPSFSSTEAQEAHHKEEKVKKKKSIMKKTSCNKNTDMVDGKHPTYRGVRMRQWGKWVSEIREPKKKSRIWLGTFPTAEMAARAHDVAVLSIKGTSAFLNFPELAAVLPRPVSNSPKDIQAAAAKAAAINYQINPQGRPEPDSEVMQADAPELSSSPSTDDDDTFFNLPDILNHGGSDEFHYSSLWLLAGADYRDSGFRLEEPFLWDSY 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1672 230 SUPERFAMILY DNA-binding domain 66 124 IPR016177 GO:0003677
Acco12g1672 230 MobiDBLite consensus disorder prediction 170 184 - -
Acco12g1672 230 Gene3D AP2/ERF domain 66 124 IPR036955 GO:0003700|GO:0006355
Acco12g1672 230 ProSiteProfiles AP2/ERF domain profile. 66 123 IPR001471 GO:0003700|GO:0006355
Acco12g1672 230 PRINTS Ethylene responsive element binding protein signature 67 78 IPR001471 GO:0003700|GO:0006355
Acco12g1672 230 PRINTS Ethylene responsive element binding protein signature 89 105 IPR001471 GO:0003700|GO:0006355
Acco12g1672 230 SMART rav1_2 66 129 IPR001471 GO:0003700|GO:0006355
Acco12g1672 230 FunFam Ethylene-responsive transcription factor 2 65 124 - -
Acco12g1672 230 MobiDBLite consensus disorder prediction 155 188 - -
Acco12g1672 230 MobiDBLite consensus disorder prediction 1 65 - -
Acco12g1672 230 MobiDBLite consensus disorder prediction 10 30 - -
Acco12g1672 230 Pfam AP2 domain 65 115 IPR001471 GO:0003700|GO:0006355
Acco12g1672 230 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 36 194 - -
Acco12g1672 230 CDD AP2 67 125 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1672 Acco-ChrAcco12 27609168 27609860 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1672 63 226 AP2-EREBP Transcription Factor Family AT2G44940 52.970 1.05e-59 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco12g1672 AP2 2.2e-12 CL0081