Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1668 ATGGAAACAGGACAACAAGAACCAGAAGCTTTCCTTCACACTCAACTTCAGTTAACCACTACCTCTTCTTCTTCCTCCGGCACCACAGAAGCCATTAATCTACACCATGAAGCCCATAACAAAGAAGAGAGGGTGAAGAGGAAGAAGACGATGAAGAAGAACACAGACATGGTGGACGCGAAGCATCCAACGTACAGAGGCGTACGTATGCGTCAATGGGGGAAATGGGTTTCAGAAATCAGAGAACCCAGAAAGAAATCCAGAATATGGCTCGGCACTTTTGCCACTGCGGAAATGGCTGCTCGAGCTTACGACGTCGCCGCTCTCACCATTAAAGGCGCCTCTGCTTTCCTCAACTTCCCGGAGCTAGCCACCGTACTCCCTCGTCCGGCCAGTAACTCCCCAAAGGACGTCCAAACCGCCGCCGCCAAAGCAGCCGCCATCAATTACCACATCAACCGTCAAGGACGACCCGAACCTGAGTCCGACGTCATGCCAGCCGACGCTCCGGCTTTGTCAAGTTTGCCGTCAACGGAGGATGGTGACCTCTTCTTCAACCTCCCCGATATCTTAAATAACGGCGGCACCGGCGAGTTTCATTACTCCTCGCTGTGGCTTACAGCGGGCGCCGATTACAGAGAATCTGGTTTTTGGCTCGAAGAGCCATTTCCATGGGACTCTTGTTAA 687 0.524 METGQQEPEAFLHTQLQLTTTSSSSSGTTEAINLHHEAHNKEERVKRKKTMKKNTDMVDAKHPTYRGVRMRQWGKWVSEIREPRKKSRIWLGTFATAEMAARAYDVAALTIKGASAFLNFPELATVLPRPASNSPKDVQTAAAKAAAINYHINRQGRPEPESDVMPADAPALSSLPSTEDGDLFFNLPDILNNGGTGEFHYSSLWLTAGADYRESGFWLEEPFPWDSC 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1668 228 FunFam Ethylene-responsive transcription factor 2 63 122 - -
Acco12g1668 228 SUPERFAMILY DNA-binding domain 64 122 IPR016177 GO:0003677
Acco12g1668 228 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 41 190 - -
Acco12g1668 228 PRINTS Ethylene responsive element binding protein signature 65 76 IPR001471 GO:0003700|GO:0006355
Acco12g1668 228 PRINTS Ethylene responsive element binding protein signature 87 103 IPR001471 GO:0003700|GO:0006355
Acco12g1668 228 ProSiteProfiles AP2/ERF domain profile. 64 121 IPR001471 GO:0003700|GO:0006355
Acco12g1668 228 Pfam AP2 domain 63 113 IPR001471 GO:0003700|GO:0006355
Acco12g1668 228 MobiDBLite consensus disorder prediction 18 53 - -
Acco12g1668 228 Gene3D AP2/ERF domain 64 122 IPR036955 GO:0003700|GO:0006355
Acco12g1668 228 MobiDBLite consensus disorder prediction 34 53 - -
Acco12g1668 228 SMART rav1_2 64 127 IPR001471 GO:0003700|GO:0006355
Acco12g1668 228 CDD AP2 65 123 IPR001471 GO:0003700|GO:0006355
Acco12g1668 228 MobiDBLite consensus disorder prediction 18 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1668 Acco-ChrAcco12 27548361 27549047 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1668 46 223 AP2-EREBP Transcription Factor Family AT2G44940 46.047 1.62e-49 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco12g1668 AP2 1.1e-13 CL0081