Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1667 ATGGCACCAACTCTCATGGCACTAAAAAGCCAGACCGAGGAACCCATCAGGAAATTCATTAACCGAGGAGCTTGGACTCCCGAGGAAGATCGAAAGCTTGCTCAATGCATTGAACTTCATGGAGCTAAGAGGTGGAAGACTATTGCTCTTAAATCAGGTTTAAACAGATGTGGCAAGAGTTGCAGGCTGAGATGGCTCAACTATTTGAGACCAAACATCAAGAGAGGCAACATTTCACTCGAAGAAGAAGATTTGATTCTTAGGCTTCACAAACTCCTCGGAAATAGGTGGTCCTTAATAGCTGGGAGACTTCCAGGACGAACAGACAATGAAATAAAAAACTATTGGAATTCTCATTTGTGTAAAAAAGTCAGTAACCTTGAAGAGAGGAAGAAGAACCCAGGCACTAGTTCAACAACCCCACTAGAAAAAACACCCCAAAATACCTGGGATAGTGCCATAGTGGAGAATGAGGAAGCCACTAATGGAAATGGAACAACTTTGAACTCGGAAGTTAGCTTTGATGTGGATGAATTCCTTGACTTCTCTGCCAAGGAGTTGGATTGGGTAAACAAGTATCTAGAACTAGATGAGTTTCCAGGGAGCAATGGGGTATTTTGA 621 0.4267 MAPTLMALKSQTEEPIRKFINRGAWTPEEDRKLAQCIELHGAKRWKTIALKSGLNRCGKSCRLRWLNYLRPNIKRGNISLEEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLCKKVSNLEERKKNPGTSSTTPLEKTPQNTWDSAIVENEEATNGNGTTLNSEVSFDVDEFLDFSAKELDWVNKYLELDEFPGSNGVF 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1667 206 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 19 148 - -
Acco12g1667 206 MobiDBLite consensus disorder prediction 127 149 - -
Acco12g1667 206 CDD SANT 24 69 IPR001005 -
Acco12g1667 206 Gene3D - 78 149 - -
Acco12g1667 206 Pfam Myb-like DNA-binding domain 75 120 IPR001005 -
Acco12g1667 206 Pfam Myb-like DNA-binding domain 22 69 IPR001005 -
Acco12g1667 206 Gene3D - 22 74 - -
Acco12g1667 206 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Acco12g1667 206 SMART sant 74 122 IPR001005 -
Acco12g1667 206 SMART sant 21 71 IPR001005 -
Acco12g1667 206 MobiDBLite consensus disorder prediction 131 149 - -
Acco12g1667 206 SUPERFAMILY Homeodomain-like 21 116 IPR009057 -
Acco12g1667 206 CDD SANT 79 120 IPR001005 -
Acco12g1667 206 ProSiteProfiles Myb-like domain profile. 17 69 IPR001005 -
Acco12g1667 206 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 73 IPR017930 -
Acco12g1667 206 FunFam MYB-related transcription factor 21 74 - -
Acco12g1667 206 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 124 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1667 Acco-ChrAcco12 27484283 27485519 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1667 17 146 MYB Transcription Factor Family AT5G52600 59.091 3.50e-50 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco12g1667 Myb_DNA-binding 3.5e-18 CL0123