Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1636 ATGAAGAAGAAAAATGAAACCCGTAGCGCCGTTGTCGTGGTTCACCTTGTCCCGATGGGTGCCTACAAGTATGTCTCAGAGCTTTGGCGCAAGAAGCAGTCCGATGTTATGAAATTCCTGCAGAGGGTGAGGTGCTGGGAGTATCGGCAGCAACCCTCCATTGTCCGTTTGACAAGGCCTACACGTCCTGACAAGGCCCGTCGCTTGGGTTACAAAGCTAAGCAGGGTTACGTGATTTACCGTGTTCGTGTTCGAAGGGGTGGTAGGAAGAGACCAGTTCCTAAAGGTATTGTATATGGTAAGCCCACAAACCAGGGTGTTACCCAACTGAAATTTCAGAGGAGCAAGAGGTCAGTGGCTGAGGAGCGTGCTGGACGGAAGCTTGGTGGCCTTAGGGTCCTCAATTCTTACTGGGTGAATGAGGACTCGACATATAAGTACTATGAGATCATCCTGGTGGATGTGGCTCACAATGCCATCAGAAATGATCCAAGGATCAACTGGCTCAGCAATCCTGTCCACAAACACAGGGAGCTGCGCGGCCTAACTTCTGCTGGTAAGAAATACAGAGGCCTCCGGGGAAGAGGACACCGCAACCACAAAGCTCGCCCATCCCGCAGGGCTACCTGGAAGAGAAACAATACTCTTTCCTTGCGTCGCTATCGCTAA 669 0.5142 MKKKNETRSAVVVVHLVPMGAYKYVSELWRKKQSDVMKFLQRVRCWEYRQQPSIVRLTRPTRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWVNEDSTYKYYEIILVDVAHNAIRNDPRINWLSNPVHKHRELRGLTSAGKKYRGLRGRGHRNHKARPSRRATWKRNNTLSLRRYR 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1636 222 SMART Ribosomal_L15e_2 20 211 IPR000439 GO:0003735|GO:0005840|GO:0006412
Acco12g1636 222 MobiDBLite consensus disorder prediction 188 207 - -
Acco12g1636 222 FunFam Ribosomal protein L15 19 222 - -
Acco12g1636 222 Gene3D Ribosomal protein l15e 19 222 IPR024794 GO:0003735|GO:0005840
Acco12g1636 222 MobiDBLite consensus disorder prediction 190 207 - -
Acco12g1636 222 Pfam Ribosomal L15 20 208 IPR000439 GO:0003735|GO:0005840|GO:0006412
Acco12g1636 222 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 19 213 IPR012678 GO:0003735|GO:0005840|GO:0006412
Acco12g1636 222 ProSitePatterns Ribosomal protein L15e signature. 64 87 IPR020925 GO:0003735|GO:0005840|GO:0006412
Acco12g1636 222 PANTHER RIBOSOMAL PROTEIN L15 19 222 IPR000439 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1636 Acco-ChrAcco12 27058094 27061559 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1636 19 222 Cytoplasmic Ribosomal Protein Gene Family AT4G16720 91.667 8.10e-128 357