Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1603 ATGGATCTGACGTCATCTCATGCATCGCCTGTTCTCACTGATCCTGTTCCAATAAGCAAGTCAAGACTAGGAATGCATTCTGGTCTCTTAAGTTACTCCCAGCAAGATTCTTCTTTACCTCTCTCATCATCACTCTCTCCTGTAAAGTATTCAAGAACTAGTTCAAGAAAGAGTTCAGGGAATCTTGATGATGTTCGCTCTAATGGTTGGCTTGACGCCATGAAAGCTTCTTCTCCTCCAAGCAAGAAGAATCCCAATAAGGCCTTCAACTCCCACATCGACTCCTCCGAACAAGACTTTTGCTCCTGGTTGCTGGAATATCCATCAGCACTAGAGTGTTTTGAGGAAATGATTGAGCATGCCAAGAACAAGAAGATTGCAATGTTCCTAGACTACGATGGCACTCTTTCACCCATAGTGGATGATCCAGATCGTGCTTTCATGTCTGAAGCTATGCGTAGTGTAGTGAGGAATGTGGCTGAGTGTTTTCCTACGGCAATCATCAGTGGAAGAAGCCGAGACAAGGTTTATGATTTAGTTAAACTAACGGAACTGTACTATGCTGGTAGTCATGGGATGGACATTGTTGGGCCTGCTTCTCACACTCTGTCCAATACCCATCCAGAGTGCATCAAGTCTTCTGACCAACAGGGAAAGGAGATAACTCTGTTTCAACCTGCGAGAGAATTCCTGCCTCTGATTGATGAGGTTTATAAGAGGCTGGTGGAGATAACTAAAGATATACAAGGTGCATATGTTGAGAACCACAAGTTTTGTGTTTCTGTACATTATCGTAATGTAGAAGAAAATAATTGGACAGTTATTGGACAAATTGTACATGATACGTTAAAAGATTACCCTCTTCTACGTTCAACATATGGACGTAAGGTTTTAGACATTCGTCCTGTAATAGATTGGAATAAAGGAAAGGCTGTTGAATTCTTACTCGCGTGCCTAGGGTTAAGTGAAGGAGATGATGACGTGTTTGCCTTTTTCATAGGAGATGATAAGACCGATGAAGATGCTTTTAAGGTGCTGAGAGAGAGTAAAGGAGGTTATGGGATTTTAGTTTCGTCCACCAAAAAACAAAGCAATGCTTTCTATTCTCTCCGGGACACATCTGAGGTCATGAAATTTCTGGAAATGTTGGTGAACTGGAAGAGGGAAGAAGAAAACAAACACCAATAA 1188 0.4184 MDLTSSHASPVLTDPVPISKSRLGMHSGLLSYSQQDSSLPLSSSLSPVKYSRTSSRKSSGNLDDVRSNGWLDAMKASSPPSKKNPNKAFNSHIDSSEQDFCSWLLEYPSALECFEEMIEHAKNKKIAMFLDYDGTLSPIVDDPDRAFMSEAMRSVVRNVAECFPTAIISGRSRDKVYDLVKLTELYYAGSHGMDIVGPASHTLSNTHPECIKSSDQQGKEITLFQPAREFLPLIDEVYKRLVEITKDIQGAYVENHKFCVSVHYRNVEENNWTVIGQIVHDTLKDYPLLRSTYGRKVLDIRPVIDWNKGKAVEFLLACLGLSEGDDDVFAFFIGDDKTDEDAFKVLRESKGGYGILVSSTKKQSNAFYSLRDTSEVMKFLEMLVNWKREEENKHQ 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1603 395 Gene3D - 228 395 IPR023214 -
Acco12g1603 395 Gene3D - 126 214 IPR023214 -
Acco12g1603 395 CDD HAD_TPP 127 378 - -
Acco12g1603 395 FunFam Trehalose 6-phosphate phosphatase 233 393 - -
Acco12g1603 395 MobiDBLite consensus disorder prediction 34 90 - -
Acco12g1603 395 FunFam Trehalose 6-phosphate phosphatase 227 303 - -
Acco12g1603 395 NCBIfam trehalose-phosphatase 124 384 IPR003337 GO:0003824|GO:0005992
Acco12g1603 395 SUPERFAMILY HAD-like 127 387 IPR036412 -
Acco12g1603 395 MobiDBLite consensus disorder prediction 34 65 - -
Acco12g1603 395 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 51 394 IPR044651 GO:0004805|GO:0005992
Acco12g1603 395 Pfam Trehalose-phosphatase 129 374 IPR003337 GO:0003824|GO:0005992
Acco12g1603 395 NCBIfam HAD-IIB family hydrolase 128 347 IPR006379 -
Acco12g1603 395 FunFam - 126 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1603 Acco-ChrAcco12 26319531 26326620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1603 120 383 Trehalose Biosynthesis Gene Families AT1G70290 25.532 2.54e-08 54.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco12g1603 12 26319531 26326620 Acco12g1603 12 26319531 26326620 ECH