Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1600 ATGTCATCCTCTTCTAACATTACAACTGCTGCCTCTACCTTATCTCAGCTGGACCACTTGCCTCCTTCCTCCGACCAGCTTTGTTATGTCCACTGCAACCTTTGTGACACTGTCCTCGCTGTGAGCGTTCCTTGCACGAGCTTGTTCAAGACAGTGACTGTGCGATGTGGCCATTGCACCAACCTTCTTCCTGTGATTGTCAACATGAGAGGCTTGCTTCCTCCCTCTCCAAATCATCATCCATTTCACCTCTCTAACTCTTTCTTCTCTCCCCCTCCTCCTCCCTCTCTTAACTTCCTGGATCAGGAGATGCCAAACTCATCAAATCACAACTTCTCTGTGCCTCCCACAGCTCCTAGGGTTGCAGCAACTAACGAGCTTCCACGCCCACCCCTCATCAATAGACCCCCTGGGAAGAGGCAGAGAGTCCCATCTGCTTATAATCGCTTCATCAAGGACGAGATCCAACGCATCAAGTCTGCAAATCCTGATATATCCCACAGAGAAGCCTTTAGCGCAGCTGCCAAGAATTGGGCCCACTTCCCTCACATACACTATGGTCTCATGCCTGATCAGACTGTGAAGAAGACAAATGTGTCCCAGCAGGAAGGAAACGACGACGTTCGCATCATCAAAGATAATGGCCTTTTCTCTTCTGCTAATCTTGGTGTTTCTCCTTATTAA 684 0.4898 MSSSSNITTAASTLSQLDHLPPSSDQLCYVHCNLCDTVLAVSVPCTSLFKTVTVRCGHCTNLLPVIVNMRGLLPPSPNHHPFHLSNSFFSPPPPPSLNFLDQEMPNSSNHNFSVPPTAPRVAATNELPRPPLINRPPGKRQRVPSAYNRFIKDEIQRIKSANPDISHREAFSAAAKNWAHFPHIHYGLMPDQTVKKTNVSQQEGNDDVRIIKDNGLFSSANLGVSPY 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1600 227 SUPERFAMILY HMG-box 132 182 IPR036910 -
Acco12g1600 227 PANTHER PROTEIN YABBY 6-RELATED 1 199 IPR006780 GO:0007275
Acco12g1600 227 CDD HMG-box_SF 142 178 - -
Acco12g1600 227 MobiDBLite consensus disorder prediction 120 142 - -
Acco12g1600 227 Pfam YABBY protein 23 188 IPR006780 GO:0007275
Acco12g1600 227 FunFam Axial regulator YABBY 133 204 - -
Acco12g1600 227 Gene3D High mobility group box domain 133 198 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1600 Acco-ChrAcco12 26274720 26277693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1600 34 225 C2C2-YABBY Transcription Factor Family AT4G00180 55.869 7.07e-57 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Acco12g1600 YABBY 9.4e-67 CL0114