Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1581 ATGGGGAGACAACCTTGCTGTGACAAACTTGAAGTGAAGAAAGGACCATGGACTGCTGAAGAAGACAAGAAGCTCATAAACTTCATTCTCACTCATGGTCAATGTTGCTGGCGAGCCGTCCCGAAGCTTGCCGGTCTGAGACGATGTGGCAAGAGTTGTAGGCTTCGTTGGACTAACTATCTTCGTCCTGACTTGAAGAGAGGCCTACTCAGTGATGCAGAAGAGAACATCGTCATCGATCTCCATTCTCGCCTTGGCAACAGGTGGTCTATGATAGCTGCAAAATTACCCGGAAGAACAGACAATGAGATTAAAAATCATTGGAACACCCACATCAAGAAGAAGCTGCTTAAGATGGGTATTGATCCTGTAACTCACAAGCCTGTCAAGAAAGAAGAAGCTGCTTCCCAGGATAATTCATCTTCTGCAGAGCATTTGTCACAATCTGACAGTGACCATAACCAGGTGAATGCTCTCAACTTAAATGAGAATTCAATCTCATCGCCGACTGAAAATTCATCTGGGGATGAACCACTTTTGAAAGAAACTGATCGTCTGAACGACCTTCTATCTAACAACACGTGGCCGGAGGAAACTTCACTACTGGTGGATGCATTATGGGAAAGCATACCTGATGCACAGAACGCAAATTATGACTTGGCACTGTCATCTTGGGAGGATAGTAGTTCCTGGTTCTTGGACTCTCAGGACTTTGGTTTTAATTGCTTCAATGAGATTGAGCCTCATGCCCTCCAGATTTCAGGAATGGAGGAGAAGGAATATTAG 786 0.4478 MGRQPCCDKLEVKKGPWTAEEDKKLINFILTHGQCCWRAVPKLAGLRRCGKSCRLRWTNYLRPDLKRGLLSDAEENIVIDLHSRLGNRWSMIAAKLPGRTDNEIKNHWNTHIKKKLLKMGIDPVTHKPVKKEEAASQDNSSSAEHLSQSDSDHNQVNALNLNENSISSPTENSSGDEPLLKETDRLNDLLSNNTWPEETSLLVDALWESIPDAQNANYDLALSSWEDSSSWFLDSQDFGFNCFNEIEPHALQISGMEEKEY 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1581 261 PANTHER F14D16.11-RELATED 1 177 - -
Acco12g1581 261 CDD SANT 16 61 IPR001005 -
Acco12g1581 261 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Acco12g1581 261 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Acco12g1581 261 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Acco12g1581 261 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Acco12g1581 261 FunFam MYB transcription factor 11 67 - -
Acco12g1581 261 Gene3D - 11 67 - -
Acco12g1581 261 FunFam transcription factor MYB80 69 129 - -
Acco12g1581 261 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Acco12g1581 261 SMART sant 66 114 IPR001005 -
Acco12g1581 261 SMART sant 13 63 IPR001005 -
Acco12g1581 261 CDD SANT 71 112 IPR001005 -
Acco12g1581 261 Gene3D - 70 155 - -
Acco12g1581 261 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Acco12g1581 261 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Acco12g1581 261 MobiDBLite consensus disorder prediction 128 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1581 Acco-ChrAcco12 25834414 25835315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1581 1 252 MYB Transcription Factor Family AT4G12350 53.381 6.73e-88 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco12g1581 Myb_DNA-binding 1.7e-14 CL0123