Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1555 ATGAATATGGACCTGTCTAAACCAAAGAAAAATTCAAACAACAAAATCATACTGGGTGACCAACAAAACAACACACTGATATGGCTGTCTTTGTCTGAGCTTCTGCTTGAAGAGGCTAAAGTAAACTTCTTTTTTTCACCAGAATCAGACATGGATTCTGTTCATTTCCTCCTGGTTTCCGTGCTTCTTCTCTTGCTTGCATTTCATGGCCTGCAACCTGTTCGAGGAAACGCCGAACTGAGAGCTTTGATGGAATTAAAGTCATCTCTGGATCCAGAGGGCAAGGTTCTTGGTTCTTGGACCAGTGATGGTGAGCCATGTAGTGGTTTGTTTGAAGGGATAGCATGCAACGAGCATAGAAAAGTGGCCAACATTTCATTGCAGGGAAAGGGGCTCTCTGGATGGCTCTCTCCAGCTGTGGCTGAACTCAAATGTCTGTCTGGTTTATACCTTCACTACAACAATCTATCTGGGGAGATCCCCAGAGAGATTTCAAATCTCACTGAGTTGGTTGATCTCTATCTTGACGTTAATAATCTAACTGGAAATATACCTCCAGAGCTCGGCCACATGCCTAATCTCCAAGTGCTGCAGTTAGGATATAACCAGCTCGTGGGAACTATACCAAAAGAGATGGGCTCCTTGAAGCAGCTTACCGCCTTGGAATTACAATGTAACAAATTAAGTGGTACAATTCCTCTCAGCTTGGGGAATACGGAGAAGCTAAGGATGCTAAACCTGAGCTTTAACAGCTTCAATGGTTCAATCCCTGCAACACTCGCTGATCTTGAAATGTTGCAAGTTCTTGATCTTCGAAACAATTCTCTATCAGGAAGGGTTCCTTCTGCTTTGAAGACATTGAGGGATGGATTCCAAGGTGCTAATAACCTGGATTTATGTGGACATGGGTTTTCTACTTTGAAAGCTTGCAGCAATGATCCAACCTTAAACTCTAGCCAGATTGACACCTCAAATCCAACCAAAGAAGGTGTTCCTGCAAAGGATTTTCCTGAACCTGCGAATATTCGGTTGCATTGTAACCAGACCCATTGCTCAAAATCAAGAATGTTTCCTCAAGCAATCATTGCAGCAAGTGTTATAACTACCATAATCACATTCATATGCGTTGGATTTCTTACTTTTATCAAATACCGACGCCAAAAGCAAAGAATTACAAATTCATCAGAATCTTCTGAAGGGAAACTTAGTCCTGATCAGCCTAAAGAACTGTACAAAAGAAGTCCATCGCCGCTCGATAATCTTAACTACTATAATGGATGGGATCCAAATTCAACGGTTGATACTCAAAATGGAAACAGATTATCCCATGAGTATCTAAACCGTTATAGGTTTACTGTGGATGAGATTGAATCTGCTACACAGTACTTATCTGAGGCTAACTTGTTAAGTAGGAGCAAATTATCAGCGGTCTACAAAGGAATCCTCAGGGATGGCTCACTTGTGGCTATAAGAAGCATTAATGTGACATGTTGTAAGACTGAGGAAGCTGAATTTGTAAATGGGTTGAACTTAGTGCTTTCATTGAGACATGAAAACCTAGTTAGACTCAGAGGTTTCTGTTGCTCAGCAAGTAGAGGTGAATGTTTCCTTGTCTATGATTTTGCTCCTAAGGGTGATTTGTCTCAATACCTTGACTTGGAAGATGGAAGTGGTCGAGTTCTAGAGTGGTCCAAGAGGGTTTCTATCATTAAGGGAATTGCAAAAGGTATTGGATATCTACACAGCAATGAAACAAACAAGGCTACAATGGTGCACCAAAATATGTCCGTTGAAAAAGTTGTGCTTGACCAACAATTCAACCCCTTGATTATGGATTCTGGCCTCCCAAAGCTTCTCGCAGATGACGCGGTTTTCTCAGCTCTGAAAGTAAGTGCAGCCATGGGATACTTAGCTCCTGAATACATCACTACTGGGAGATTCACTGAGAAAAGTGACATATATGCATTTGGGGTTATAATCCTTCAAGTAGTTTCTGGGAAAACTGTTATAGGTAGTTCAATCAAGATGGCAGTTGAGTCTTTCAGATTTGAAGACTTTGTTGATTCAAATCTGAAAGGACGATATGCGAAATCTGAAGCAGCAATTATGGCGAAGCTCGCTGTGATGTGTACTCATGAGCTTCCTGATCAGAGGCCAACTATGGTGGAAGTGATTCAGGAGATGCATGCTTTTCCAGCTCAACATGCTTCTTGA 2214 0.416 MNMDLSKPKKNSNNKIILGDQQNNTLIWLSLSELLLEEAKVNFFFSPESDMDSVHFLLVSVLLLLLAFHGLQPVRGNAELRALMELKSSLDPEGKVLGSWTSDGEPCSGLFEGIACNEHRKVANISLQGKGLSGWLSPAVAELKCLSGLYLHYNNLSGEIPREISNLTELVDLYLDVNNLTGNIPPELGHMPNLQVLQLGYNQLVGTIPKEMGSLKQLTALELQCNKLSGTIPLSLGNTEKLRMLNLSFNSFNGSIPATLADLEMLQVLDLRNNSLSGRVPSALKTLRDGFQGANNLDLCGHGFSTLKACSNDPTLNSSQIDTSNPTKEGVPAKDFPEPANIRLHCNQTHCSKSRMFPQAIIAASVITTIITFICVGFLTFIKYRRQKQRITNSSESSEGKLSPDQPKELYKRSPSPLDNLNYYNGWDPNSTVDTQNGNRLSHEYLNRYRFTVDEIESATQYLSEANLLSRSKLSAVYKGILRDGSLVAIRSINVTCCKTEEAEFVNGLNLVLSLRHENLVRLRGFCCSASRGECFLVYDFAPKGDLSQYLDLEDGSGRVLEWSKRVSIIKGIAKGIGYLHSNETNKATMVHQNMSVEKVVLDQQFNPLIMDSGLPKLLADDAVFSALKVSAAMGYLAPEYITTGRFTEKSDIYAFGVIILQVVSGKTVIGSSIKMAVESFRFEDFVDSNLKGRYAKSEAAIMAKLAVMCTHELPDQRPTMVEVIQEMHAFPAQHAS 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1555 737 Gene3D Ribonuclease Inhibitor 77 353 IPR032675 -
Acco12g1555 737 FunFam Protein NSP-INTERACTING KINASE 2 434 541 - -
Acco12g1555 737 Pfam Leucine rich repeat 217 276 IPR001611 GO:0005515
Acco12g1555 737 Gene3D Phosphorylase Kinase; domain 1 429 541 - -
Acco12g1555 737 PANTHER LEUCINE RICH REPEAT KINASE 2 40 223 - -
Acco12g1555 737 ProSiteProfiles Protein kinase domain profile. 463 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1555 737 SUPERFAMILY L domain-like 79 301 - -
Acco12g1555 737 SUPERFAMILY Protein kinase-like (PK-like) 438 728 IPR011009 -
Acco12g1555 737 FunFam Protein NSP-INTERACTING KINASE 2 76 225 - -
Acco12g1555 737 Pfam Protein tyrosine and serine/threonine kinase 469 727 IPR001245 GO:0004672|GO:0006468
Acco12g1555 737 FunFam Protein NSP-INTERACTING KINASE 2 542 732 - -
Acco12g1555 737 MobiDBLite consensus disorder prediction 390 414 - -
Acco12g1555 737 SMART LRR_typ_2 191 215 IPR003591 -
Acco12g1555 737 SMART LRR_typ_2 263 293 IPR003591 -
Acco12g1555 737 SMART LRR_typ_2 143 167 IPR003591 -
Acco12g1555 737 Gene3D Transferase(Phosphotransferase) domain 1 542 734 - -
Acco12g1555 737 Pfam Leucine rich repeat N-terminal domain 77 117 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1555 Acco-ChrAcco12 25352645 25356956 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1555 58 576 Miscellaneous Gene Families AT4G22730 57.463 0.0 571
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Acco12g1555 PK_Tyr_Ser-Thr 4.3e-32 CL0016