Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1539 ATGGATCAAATTACAGCACATCCCCATTCTCTTCCTCCTCCATTTCACACGAGGGATCTTCATCATCCACACCATCAATTTCACTCTCTTCATCACCAAAACACAGAAGATGAGCAAAGCGGAAGCAGCGGCGGACACAACCTCACTCAGAAAAGGGATCGTGAAGACAACAGCAACAGCGATGGCAAAGACATGGCAGCTGGAGCCTCCGGTGAGGGCGAGATGACGAGAAGACCCCGAGGACGGCCAGCTGGCTCCAAGAACAAGCCCAAGCCACCCATCATCATCACGCGCGACAGCGCCAACGCGCTAAGGACACATGTCATGGAGGTTGCTGACGGCTGTGATATCGTCGAGAGCGTCTCCAACTTCGCCCGGCGGCGGCAGAGAGGGGTTTGCATAATGAGTGGGACCGGCACGGTGACGAATGTTACTTTGAGGCAGCCAGCTTCTCCGGGAGCCGTCGTCACTCTCCACGGAAGGTTTGAGATATTGTCGCTGGCTGGATCATTCTTACCGCCTCCGGCTCCACCGGCTGCTTCGGGATTAACTATATATCTAGCTGGAGGACAAGGGCAAGTGGTCGGAGGAAGCGTGGTTGGGACACTAATAGCTTCAGGTCCGGTGGTGATCATGGCTGCGTCGTTTAGTAACGCCGCGTATGAGAGGCTTCCCTTGGAAGAAGATGATCCCTCCATGCCGATGCAAGGTGAAGGCGGTGGTGGCGATGGCGGAATTGGGTCGCCGGGCGGAGGCGGTCAACAGCAAGGAGGGCAGCTTTTAGGGGACGGAAATGCAACGGCTCCACTTTTCCATGGCTTGCCTCCAAATCTTCTGAATTCTATACAGATGACATCGGAAGCTTTCTGGGCTACCGGTCGGCCTCCATATTGA 894 0.5537 MDQITAHPHSLPPPFHTRDLHHPHHQFHSLHHQNTEDEQSGSSGGHNLTQKRDREDNSNSDGKDMAAGASGEGEMTRRPRGRPAGSKNKPKPPIIITRDSANALRTHVMEVADGCDIVESVSNFARRRQRGVCIMSGTGTVTNVTLRQPASPGAVVTLHGRFEILSLAGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGTLIASGPVVIMAASFSNAAYERLPLEEDDPSMPMQGEGGGGDGGIGSPGGGGQQQGGQLLGDGNATAPLFHGLPPNLLNSIQMTSEAFWATGRPPY 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1539 297 CDD DUF296 105 172 IPR005175 -
Acco12g1539 297 Gene3D - 104 232 - -
Acco12g1539 297 MobiDBLite consensus disorder prediction 1 95 - -
Acco12g1539 297 SUPERFAMILY AF0104/ALDC/Ptd012-like 101 230 - -
Acco12g1539 297 PIRSF ESCAROLA 16 297 IPR014476 GO:0003680
Acco12g1539 297 MobiDBLite consensus disorder prediction 227 267 - -
Acco12g1539 297 FunFam AT-hook motif nuclear-localized protein 104 231 - -
Acco12g1539 297 Pfam Plants and Prokaryotes Conserved (PCC) domain 105 218 IPR005175 -
Acco12g1539 297 ProSiteProfiles PPC domain profile profile. 101 237 IPR005175 -
Acco12g1539 297 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 38 292 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1539 Acco-ChrAcco12 25062686 25063579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1539 1 297 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 57.612 2.85e-89 267