Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1527 ATGAAAGGGGTCAGTCAAATTCCCCTCTTTGTTCATCATGTTCTTCTGTTTGCTGCTCTTTTATCACTTTCCTCTCTCAAAGTCTCATCATCACCAGAATCTGAGAAGGAAATTCTGCTTCAATTGAAGGGAAATGTCACTGATGACCCCTATAATAGCTTGAATTCATGGGTATCAAGTGGAAACCCATGTGAAGATTACATGGGTATTTCTTGTAATTCACAAGGATTTGTAGAAAAAGTTGTTCTTTGGAACACTAGCTTAGCTGGAGTTTTGTCCCCATCATTGTCCAGGTTAAAGTTGTTAAAGGTTATGACATTGTACGGGAATCATTTTTCTGGTAAAATCCCAGAAGAATATGCTGAGTTTCAATCATTATGGAAGATCAATTTGAGCTCTAATGCCTTATCTGGTCCAATCCCAGACTTCATGGGTAATATAAAGAGCTTACGTTTTCTTGATTTGTCACTAAATGGCTTCTCTGGAGATATACCATCAGCTTTGTTTAAATACTGCTACAAAACCAAGTTCCTTTCTCTTTCTCACAACAATCTTTCAGGGTCAATTCCAGATTCCATAGTGAATTGCTTGAACCTTGAAGGTTTTGATTTTTCCTTCAACAATCTCACTGGGAATATTCCTTCAAGACTTTGCGATATTCCAAGGTTGTCCTATGCATCAGTGAGGAACAATGCCTTGTCAGGGACAGAGCAAGATCAGATTTTCTCAGAATGTCACAGTTTGGTATATATAAATCTTGCTAGTAACATGTTCAGTGGTTCTGCTCCATTCAACATCCTTGAAATGAAAAATCTTACTTATTTCAATATATCATATAATGGATTCAGTGGACATATTCCTGAGATGAGTTCCTGTAGTGAGATATTGGAATTTTTGGATGCTTCAGGTAATGATTTGGAAGGGGAGATTCCAATGAGCATGGCAAGATGCAAGAAGCTCAAGCTTTTGGCCTTGGAGGTAAATAGGCTTATAGGGACTATCCCATTAGGGATTCAAGAATTGAAGAGTCTATTAGTTGTTAAACTGGGTGATAACTCCATTGGTGGAATCATTCCTAAGGATTTTGGTAACATTGAACTGCTTGAGATTCTGGATCTACACAATCTAAACCTCATTGGTGAAATTCCAAATGATTTAAGCAACTGCAGGTTTCTTCTTGAGTTGAATGTTTCTGGTAATAACTTGGAGGGAGAGATTCCTCACACCCTTTACAACATGACAAACTTGGAGATTCTTGACCTGCATCTAAACAAGCTCAATGGAAACATCCCACCAAGCCTAGGAAACTCATCAAGCATCAGATACCTGGATTTGTCACATAATTTACTTTCTGGTTCAATCCCTTCTTCCCTTGGAAATTTAAAACTCTTAACGTATTTTAATTTGTCATTCAACAATCTCTCTGGTATTATTCCTCCTATTGCAAACATACAAGGTTTTGGTTCTTCGGCATTTTCCAACAATCCTTTTCTCTGTGGTTCTCCTTTAGATGATAATACCTTTTGCTCAGAAAATGGCACAAATCATTCACCTTCAGCTTCTGGGAAGACCAGAGTGCTTAGTGTGTCTGCAATTGTTGCCATTGTTGCTGCAGCCTTCATTCTCGCTGGGGTTTTTTTGGTCGTCATCTTGAACACTAAGACTCGGAACAGAAACGAAGAAGATCATCAGACGATGATTGTTGAGAGCACACCTCTTGGGTCAACAGGATCAAGTGTTGTAATTGGGAAGCTGGTTCTCTTCAACAAAAGCTTACCATCAAAGTATGAAGATTGGGAAGCAGGAAGAAAAGCATTGCTTGACAAAGAGTCTCTGATTGGCGCCGGATCAATCGGTACAGTGTACAGAAAAAATCTTGAAGGTGGGGCTTCAGTTGCAGTCAAAAAGCTTGAAACTTTGGGAACAATCAGAAGCCAGCACGAGTTTGAACACGAAATAGTTCGACTAGGCAACCTCAAACACCCAAACTTAGTTTCTTTCCAAGGTTACTATTGGTCCCCAACAATGCAAATGATCCTATCAGAGTTCATCCCAAATGGCAATCTCTATGACAATCTACATGGAAACAGTGAACAACTAAATTGGTCCAGAAGGGTACAGATTGCACTGGGAACATCAAGAGCTCTTTCCTATCTTCACCATGACTGTGAATTTCCAATTCTACATCTCAACCTTAAATCCTCCAACATACTCTTAGACAACAAGTATGAAGCAAAGCTATCAGATTATGGCCTAAACAAGTTACTTCCTATTAACAATTACTATGGTGGCACCCAGTTCCACAATTCAGTGGGGTACATTGCACCAGAGTTGGCTACGAGTTTAAGGCAGAGCGAGAAATGTGATGTTTACAGCTTCGGGGTGATTCTGTTGGAACTGGTCACGGGGAATAAGCCTGTAGAAAGTAGTGTAGCAGCAGTAGAAAATGGAGGAATGGTAGTGGTGTTGTGTGAGTATGTGAGAGTTTTGTTGGAGAGTGGTTCTGCTTCAGATTGCTTGGATAGAAGGTTGGTAGGAGGCTTGGCTGAGAGTCAGTTTATTCAGGTGATGAGGATGGGACTAATTTGTACTTCAGAAGATCCTTCTAGAAGACCAACCATGGCTGAAATTGTGCAGTTCCTTGAGTCAATTGAAATTGTACCTGTTTGGCATGATGTTTAA 2682 0.3978 MKGVSQIPLFVHHVLLFAALLSLSSLKVSSSPESEKEILLQLKGNVTDDPYNSLNSWVSSGNPCEDYMGISCNSQGFVEKVVLWNTSLAGVLSPSLSRLKLLKVMTLYGNHFSGKIPEEYAEFQSLWKINLSSNALSGPIPDFMGNIKSLRFLDLSLNGFSGDIPSALFKYCYKTKFLSLSHNNLSGSIPDSIVNCLNLEGFDFSFNNLTGNIPSRLCDIPRLSYASVRNNALSGTEQDQIFSECHSLVYINLASNMFSGSAPFNILEMKNLTYFNISYNGFSGHIPEMSSCSEILEFLDASGNDLEGEIPMSMARCKKLKLLALEVNRLIGTIPLGIQELKSLLVVKLGDNSIGGIIPKDFGNIELLEILDLHNLNLIGEIPNDLSNCRFLLELNVSGNNLEGEIPHTLYNMTNLEILDLHLNKLNGNIPPSLGNSSSIRYLDLSHNLLSGSIPSSLGNLKLLTYFNLSFNNLSGIIPPIANIQGFGSSAFSNNPFLCGSPLDDNTFCSENGTNHSPSASGKTRVLSVSAIVAIVAAAFILAGVFLVVILNTKTRNRNEEDHQTMIVESTPLGSTGSSVVIGKLVLFNKSLPSKYEDWEAGRKALLDKESLIGAGSIGTVYRKNLEGGASVAVKKLETLGTIRSQHEFEHEIVRLGNLKHPNLVSFQGYYWSPTMQMILSEFIPNGNLYDNLHGNSEQLNWSRRVQIALGTSRALSYLHHDCEFPILHLNLKSSNILLDNKYEAKLSDYGLNKLLPINNYYGGTQFHNSVGYIAPELATSLRQSEKCDVYSFGVILLELVTGNKPVESSVAAVENGGMVVVLCEYVRVLLESGSASDCLDRRLVGGLAESQFIQVMRMGLICTSEDPSRRPTMAEIVQFLESIEIVPVWHDV 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1527 893 Gene3D Ribonuclease Inhibitor 31 172 IPR032675 -
Acco12g1527 893 Gene3D Ribonuclease Inhibitor 173 240 IPR032675 -
Acco12g1527 893 Pfam Leucine rich repeat 394 450 IPR001611 GO:0005515
Acco12g1527 893 FunFam Putative LRR receptor-like serine/threonine-protein kinase 584 683 - -
Acco12g1527 893 Gene3D Phosphorylase Kinase; domain 1 588 684 - -
Acco12g1527 893 Gene3D Ribonuclease Inhibitor 241 510 IPR032675 -
Acco12g1527 893 Gene3D Transferase(Phosphotransferase) domain 1 685 887 - -
Acco12g1527 893 SUPERFAMILY L domain-like 170 503 - -
Acco12g1527 893 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g12460 171 512 - -
Acco12g1527 893 FunFam Putative LRR receptor-like serine/threonine-protein kinase 685 887 - -
Acco12g1527 893 Pfam Protein kinase domain 609 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1527 893 SUPERFAMILY Protein kinase-like (PK-like) 609 884 IPR011009 -
Acco12g1527 893 SUPERFAMILY Outer arm dynein light chain 1 79 190 - -
Acco12g1527 893 PANTHER OS05G0588300 PROTEIN 303 408 - -
Acco12g1527 893 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g12460 32 170 - -
Acco12g1527 893 Pfam Leucine rich repeat N-terminal domain 33 73 IPR013210 -
Acco12g1527 893 ProSiteProfiles Protein kinase domain profile. 607 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1527 Acco-ChrAcco12 24771195 24774110 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1527 14 885 Receptor kinase-like Gene Family AT1G62950 60.090 0.0 1014
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Acco12g1527 Pkinase 1.6e-37 CL0016