Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1511 ATGGCTCATTTTAATTTTGGTGAAACGCTATCCTTTGGAGGTTCAAACCATGGACTGGATCACCTAACTGTTCCGTTTAAAACCACTACGAACTCCTCCCTAAGGGTCTTGCTTCTCCATGGAAACTTAGAAATATGCGTGAAAGAGGCCAGAAACCTGCCTAATTTAGACATGTTCCATCAGAAAGTAGGGGATATGTTTTCCAGATTACCTGGAAAACTCGGCCAAAACATTCAAGAGCATATGTCCAATTCAATTATTACTAGTGATCCCTACGTGACTGTGTCTTTGGCTGGTGCTGTAATTGCAAGAACATTTGTGTTCAATAACGACGAGAACCCTAGCTGGATGCAGCATTTCAATGTTCCCGTTGCACATTATGCTGCTGAAGTACATTTCGTGGTAAAGGACAACGATATTGTGGGCTCACAAATCATGGGTGCGGTTGGAATTCCAGTGGAACAGTTATTCCAAGGCACAAAAGTTGAAGGGTCCTTTCCAATCCTAAATTCTAGTGGGAAACCTTGCAAAGATGGAGCAGTCTTGAGTTTATCCATTCAATACATTCCTTTTGATAAGGTGGCTCTTTCTGGTCATGGAATAGGAGCGGGTCCTAGTTATGAAGGTGTTCCAGGTACATACTTCCCCCTTAGGAAGGGCGGTCGAGTTAGACTTTATCAAGACGCTCATGTTCATGGTGGTTCTCTTCTTCCTAGTTTGAAGATGGAAGGTGGCGTGAGTTATGAGCATGGTGATCTTCTCAAAACCAAATCACAGGAAGGTGTGAGAGTGCTGCTACTTGTGTGGGACGATCCTACTTCCAGAAGCATGATAGGTGGATATAAAACGACTGGACTTATGGACACTCATGATGAGGACACGCGCCAGTTTTTCAAGGGCTCTTCAGTGCAAGTTCTGCTTTGTCCCCGTTCAAGTGGAAAAGGACATAGTTGGGTCAAACAACAGGAAGCTGGAACCATCTATACTCATCATCAGAAAACAGTCATTGTGGATGCTGATGCAGGCCATCATAAAAGAAAGATTATATCTTTTATTGGAGGTCTTGATTTATGTGATGGCAGATATGATACTCCACAACATCCTCTCTTCAGATCACATGATGATTCATTACTTAAAATTGATAGAATCCCTGATATCCTTAGTATTGCTGATGTTTCAAGCTCGAATGATGATAACCCAGAAGCTTGGCATGTCCAGGTCTTTCGTTCAATTGATTCCAACTCTGTCAAAGGATTTCCCAAGGATCCTAAAGATGCTGTAAAAAAGGTGGAAACTTTCAGCCAGAGCTGCTTCATTAACTTGGTTTGTGGAAAGAATATACTGATAGACATGAGCATACATTCTGCATATGTCAAGGCTATCAGATCTGCCCAAAAATTCATCTATATTGAGAACCAATACTTCCTTGGCTCGTCATATAATTGGGATTCTCAGAAAGGCATAGAAAAAATGCCATATGAAGTTTGTCTCAACAGTCAACATGATAATGTTGAAGGTGCAAACAATTTAATTCCAATGGAAATTGCTCTCAAAATAGCTTCCAAAATCAAACAACATGAGAGATTTGCTGCTTATATTCTCATTCCTATGTGGCCTGAAGGTGTACCAACAAGTAAACCTACTCAAAGGATTCTCTTCTGGCAGTTTAAAACAATGCAAATGATGTACGAGACAGTTTACAAGGCCTTACAAGAGGCTGGACTTGACAATGAGTATGAACCGCAGGACTACTTGAATTTCTTTTGCCTTGGGAATCGTGAGGCCCCAGAAAACCAGATTATTGTAAATGCTAGAAATGTTGCTGGGGCAAACACTGCTCAACCTCAGGTGTATGGATATAGAATGTCACTGTGGGGTGAACATATTGGAAGCATTGAGGAGTGTATGAAGGAACCAGAGACTGTTGAATGTGTGAGACGGGTGAGGCACTTGGGTGAACAAAACTGGAGACAGTACATAGCTGAAGAGGTAACAGACATGAAGGGCCATTTATTGAAATACCCACTTGAAGTTGATTCAATGGGGACAGTGAAGCCTCTTCCTGGCTGTGAGACATTTCCTGATGTTGGTGGAAACATCAAGGGCACTTTTATTCCCATTCAAGAAAATCTCACCATCTGA 2142 0.4174 MAHFNFGETLSFGGSNHGLDHLTVPFKTTTNSSLRVLLLHGNLEICVKEARNLPNLDMFHQKVGDMFSRLPGKLGQNIQEHMSNSIITSDPYVTVSLAGAVIARTFVFNNDENPSWMQHFNVPVAHYAAEVHFVVKDNDIVGSQIMGAVGIPVEQLFQGTKVEGSFPILNSSGKPCKDGAVLSLSIQYIPFDKVALSGHGIGAGPSYEGVPGTYFPLRKGGRVRLYQDAHVHGGSLLPSLKMEGGVSYEHGDLLKTKSQEGVRVLLLVWDDPTSRSMIGGYKTTGLMDTHDEDTRQFFKGSSVQVLLCPRSSGKGHSWVKQQEAGTIYTHHQKTVIVDADAGHHKRKIISFIGGLDLCDGRYDTPQHPLFRSHDDSLLKIDRIPDILSIADVSSSNDDNPEAWHVQVFRSIDSNSVKGFPKDPKDAVKKVETFSQSCFINLVCGKNILIDMSIHSAYVKAIRSAQKFIYIENQYFLGSSYNWDSQKGIEKMPYEVCLNSQHDNVEGANNLIPMEIALKIASKIKQHERFAAYILIPMWPEGVPTSKPTQRILFWQFKTMQMMYETVYKALQEAGLDNEYEPQDYLNFFCLGNREAPENQIIVNARNVAGANTAQPQVYGYRMSLWGEHIGSIEECMKEPETVECVRRVRHLGEQNWRQYIAEEVTDMKGHLLKYPLEVDSMGTVKPLPGCETFPDVGGNIKGTFIPIQENLTI 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1511 713 Pfam Phospholipase D Active site motif 327 361 IPR001736 GO:0003824
Acco12g1511 713 ProSiteProfiles C2 domain profile. 20 166 IPR000008 -
Acco12g1511 713 PANTHER PHOSPHOLIPASE D 614 702 IPR015679 -
Acco12g1511 713 SMART C2_3c 42 165 IPR000008 -
Acco12g1511 713 PIRSF PLD_plant 250 374 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Acco12g1511 713 PIRSF PLD_plant 28 252 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Acco12g1511 713 PIRSF PLD_plant 602 713 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Acco12g1511 713 PIRSF PLD_plant 371 614 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Acco12g1511 713 Pfam C2 domain 41 168 IPR000008 -
Acco12g1511 713 Pfam Phospholipase D C terminal 633 703 IPR024632 -
Acco12g1511 713 Gene3D Endonuclease Chain A 413 600 - -
Acco12g1511 713 Gene3D C2 domain 25 189 IPR035892 -
Acco12g1511 713 Gene3D Endonuclease Chain A 242 382 - -
Acco12g1511 713 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 326 361 IPR001736 GO:0003824
Acco12g1511 713 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 39 191 IPR035892 -
Acco12g1511 713 CDD C2_plant_PLD 36 189 - -
Acco12g1511 713 SUPERFAMILY Phospholipase D/nuclease 249 378 - -
Acco12g1511 713 SUPERFAMILY Phospholipase D/nuclease 452 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1511 Acco-ChrAcco12 24450265 24455299 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1511 616 713 Phospholipase D Gene Family (Wang group) AT4G11850 67.347 2.64e-39 154