Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1498 ATGGATTTTCTCAGAAAAAACCAATTCGACAATTCTTCTTCTTCTTCTTCGGAGGTGACCTCGTCGAGCGGAGAGCCGATACTGTTACTGGCGTCCGAGCGGCCCAAGAAGCGAGCGGGACGGAGGGTTTTCAAGGAGACTAGGCATCCCGTTTACAGAGGAGTGCGACGGAGGAACAACGACAAGTGGGTTTGCGAGGTTCGTGTGCCGAATGGTAACACTAGGATTTGGCTCGGAACATATTCCACGGCGGAGATGGCCGCTCGTGCTCATGACGTGGCGGCACTGGCTCTTCGTGGCAAGTTGGCTTGCCTGAATTTCTCTGACTCCACTTGGCGTTTGCCTGTTCCTGAGTCAACCAATGCGGCGGAGATCAGGCGGGTGGCGGCTCTGGCCGCAGAGGAATTCGGCCGGAGTGCGGATGATTCTGAGGTTTGCAGCAGCAGTAGTACAACGGTCAACGATGACGTCATCGAAGATGTGTCGAATGTACAGGACTACTGTCAGGAAGAAGCGACATATATTAATCAAACTCCGGCAGGGTCAACGACGGAGTTTGATCACGAGCTCCATCAATGGCTAGTAAGTATGGCGGAGGAGCCTCTCCGATCGCCACCCTCAGTTAGACCGTATGGCTGGAGCTGGTATGATGTGGAGGTTGATCCTCTGGTCTCACTGTGGCAGTACTGA 690 0.5406 MDFLRKNQFDNSSSSSSEVTSSSGEPILLLASERPKKRAGRRVFKETRHPVYRGVRRRNNDKWVCEVRVPNGNTRIWLGTYSTAEMAARAHDVAALALRGKLACLNFSDSTWRLPVPESTNAAEIRRVAALAAEEFGRSADDSEVCSSSSTTVNDDVIEDVSNVQDYCQEEATYINQTPAGSTTEFDHELHQWLVSMAEEPLRSPPSVRPYGWSWYDVEVDPLVSLWQY 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1498 229 CDD AP2 52 110 IPR001471 GO:0003700|GO:0006355
Acco12g1498 229 Pfam AP2 domain 50 100 IPR001471 GO:0003700|GO:0006355
Acco12g1498 229 PRINTS Ethylene responsive element binding protein signature 52 63 IPR001471 GO:0003700|GO:0006355
Acco12g1498 229 PRINTS Ethylene responsive element binding protein signature 74 90 IPR001471 GO:0003700|GO:0006355
Acco12g1498 229 SUPERFAMILY DNA-binding domain 51 110 IPR016177 GO:0003677
Acco12g1498 229 Gene3D AP2/ERF domain 51 109 IPR036955 GO:0003700|GO:0006355
Acco12g1498 229 MobiDBLite consensus disorder prediction 1 27 - -
Acco12g1498 229 SMART rav1_2 51 114 IPR001471 GO:0003700|GO:0006355
Acco12g1498 229 FunFam Ethylene-responsive transcription factor 2 50 109 - -
Acco12g1498 229 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 7 229 IPR045277 GO:0003700
Acco12g1498 229 ProSiteProfiles AP2/ERF domain profile. 51 108 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1498 Acco-ChrAcco12 24187065 24187754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1498 11 229 AP2-EREBP Transcription Factor Family AT4G25470 48.718 3.06e-57 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco12g1498 AP2 4.9e-14 CL0081