Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1496 ATGGCTTCATCTTCTTGTTCCAAGAGGCACCCTTTGTACCGTGGAATCCGGTGCCGGGGAGAAAAATGGGTGTCGGAGATCCGGGAGCCCCGTAAGCCATCACGTATATGGCTTGGGACATTTCCGACGCCCGAGATGGCGGCGGCTGCTTATGATGTGGCGGCGTTGGCTCTTAAAGGCAAGGATGCGGCTCTCAACTTGCCTGAGTTTGCTGGGCGGTATCCGGTGCCTCTTTCCACCTCGGCTCCTCATATTCGTAGCGCTGCCACCGCAGCTGCCTCTCTAGTGAACGTTGAAGCCATTTCCACCAGTAGTGCTACATACAAACACATTCATGCTTCTTCTTCCTCTTCCACTTCTTCATTTGTTGATGAATGTTACAATAATAATGACAGGGCCATCTCAATCTCACCGACCTGGTCTGGAACAGAAGATCATCAGTTTGTGGACGAGGATGCCATTTTCGGTATGCCTAGTTTGCTCCTAGAAATGGCAGAAGGAATGTTGCTGTCCCCTCCCAGAATCACGCCTCCAGCACCCTCAGACAATTTTCCAGTTGATTGTTTACTATATATTCCCCTTCAGGGAGACGTTAAATTCGGGTCAGACGGTGTAGGACTTCATTGTGTGCTAGAAGCAGCTGACCAAAACCAAAAAAAACAAAACACACACACAGGCACATCAAGTGTCCGTACAAAAATGGATGAAAATGTCCGTACATGGGGTCCTCACAGTTAA 738 0.4932 MASSSCSKRHPLYRGIRCRGEKWVSEIREPRKPSRIWLGTFPTPEMAAAAYDVAALALKGKDAALNLPEFAGRYPVPLSTSAPHIRSAATAAASLVNVEAISTSSATYKHIHASSSSSTSSFVDECYNNNDRAISISPTWSGTEDHQFVDEDAIFGMPSLLLEMAEGMLLSPPRITPPAPSDNFPVDCLLYIPLQGDVKFGSDGVGLHCVLEAADQNQKKQNTHTGTSSVRTKMDENVRTWGPHS 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1496 245 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 5 168 - -
Acco12g1496 245 MobiDBLite consensus disorder prediction 217 235 - -
Acco12g1496 245 ProSiteProfiles AP2/ERF domain profile. 12 68 IPR001471 GO:0003700|GO:0006355
Acco12g1496 245 SUPERFAMILY DNA-binding domain 12 68 IPR016177 GO:0003677
Acco12g1496 245 MobiDBLite consensus disorder prediction 217 245 - -
Acco12g1496 245 Pfam AP2 domain 11 60 IPR001471 GO:0003700|GO:0006355
Acco12g1496 245 CDD AP2 11 69 IPR001471 GO:0003700|GO:0006355
Acco12g1496 245 Gene3D AP2/ERF domain 12 69 IPR036955 GO:0003700|GO:0006355
Acco12g1496 245 SMART rav1_2 12 74 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1496 Acco-ChrAcco12 24110064 24111172 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1496 3 176 AP2-EREBP Transcription Factor Family AT2G36450 49.432 3.29e-42 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco12g1496 AP2 7.6e-09 CL0081