Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1486 ATGGGCAGGGCATCCAAATGGTTTCGCGCTGTTTTTGGTCTGAAGAAGTCGTCGGAGTACTCATCCTCACCGTCCCCGTCGAATCTACCACCTGGTTCAGCTTCAAAGCCACTCAAAGACAAACGCCGGTGGAGCTTCGTCAAGTCTTACAGAGAATCCCACGGCCACCACCCAGCTTTGAGAGATGAAGCGGTTCCATCGTCTGGACACATCAACGGCGGCGTGTTCCCTGACAAACACGCAATGACAGTTGCTACTGCCAAGGCTGCTGTGGCGGAAGCCGCAGTCGCGGCTGCTCGGGCCGCTGTCGCCGTTGTCAGGCTTACAAGCAGCGGTGGTTGCCCTGGGAGCATCGAGACTCGTGAGGAATGGGCGGCCATCAAGATTCAGGCCGCTTTCCGAGGATGTTTGGCAAGGAGGGCATTACGGGCATTAAGAGGATTGGTGAAGCTTCAGGCATTGGTGAGAGGTCATATTGATAGGAAACGAACAGCAGAATGGTTGCATAGAGTACATGCTCTTGTTCGAGTACAGGAACGTGTCCGTGCCGGGCGAGCTCAAATTCTGCAGACGCCATTTTCACATTCCAAGTCATTTAAAGCAGATTTCCATGGTCCAGCAACGCCAGACAAATTTGAAAGCCCAATCAGATCCAAGAGCATGAAATTTGATCATTCATCATCACTCAAGAGAAATGTATCCAAGTCCCATTTTCTGGTACATGGGAATCAAGACAAATGGTGGGACGATGATAACACTGACAGGATTCTCGAAATTGATTCTGGGAAACACTTCATGCCAAAACGCCGGAACCTCTTTCACACCATTAACTATCCTTCAGTATGTGATAATCACAGCCAAAGTTTCTCTACTGCAAAGGACTCAGTAAGTCATCAATCAGGTCACAGCATGTCTTCATTTGATGAAGGCGTCGTGGATAGTCCTCAACTCTTGTCTGTCTTCTCAAAAGACTATGGCCTCAAAACTAGTCCTTTGGCTCCAAGCAGAAGTGACGACTCAAGAAGCCATCTGAGTTCTTATTCTGACTATCCAAGCTACATGGCTTACACTGAATCTTCAAAGGCAAAACTCAGGTCACTGAGTGCTCCAAAGCAAAGGCCTCAACAATATGAGAGGTCTAATTCATCTAATAGGTACTTAATCCAAGGATTTGGTGAATCAAGATTGGCCAGCCAGAAAGCAAATGCATTGCAGGTAAACTTCACTAGCAAAGCCTATCCAGGCTCTGGTCGTTTGGACAAGTATGGTATGCCTGTGGGATATAAATTCTGA 1293 0.4795 MGRASKWFRAVFGLKKSSEYSSSPSPSNLPPGSASKPLKDKRRWSFVKSYRESHGHHPALRDEAVPSSGHINGGVFPDKHAMTVATAKAAVAEAAVAAARAAVAVVRLTSSGGCPGSIETREEWAAIKIQAAFRGCLARRALRALRGLVKLQALVRGHIDRKRTAEWLHRVHALVRVQERVRAGRAQILQTPFSHSKSFKADFHGPATPDKFESPIRSKSMKFDHSSSLKRNVSKSHFLVHGNQDKWWDDDNTDRILEIDSGKHFMPKRRNLFHTINYPSVCDNHSQSFSTAKDSVSHQSGHSMSSFDEGVVDSPQLLSVFSKDYGLKTSPLAPSRSDDSRSHLSSYSDYPSYMAYTESSKAKLRSLSAPKQRPQQYERSNSSNRYLIQGFGESRLASQKANALQVNFTSKAYPGSGRLDKYGMPVGYKF 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1486 430 Pfam IQ calmodulin-binding motif 149 163 IPR000048 GO:0005515
Acco12g1486 430 Pfam IQ calmodulin-binding motif 124 143 IPR000048 GO:0005515
Acco12g1486 430 Gene3D - 123 164 - -
Acco12g1486 430 ProSiteProfiles IQ motif profile. 122 150 IPR000048 GO:0005515
Acco12g1486 430 MobiDBLite consensus disorder prediction 287 308 - -
Acco12g1486 430 Pfam Protein of unknown function (DUF4005) 329 382 IPR025064 -
Acco12g1486 430 SMART iq_5 144 165 IPR000048 GO:0005515
Acco12g1486 430 SMART iq_5 121 143 IPR000048 GO:0005515
Acco12g1486 430 MobiDBLite consensus disorder prediction 364 383 - -
Acco12g1486 430 MobiDBLite consensus disorder prediction 17 39 - -
Acco12g1486 430 ProSiteProfiles IQ motif profile. 146 173 IPR000048 GO:0005515
Acco12g1486 430 PANTHER IQ-DOMAIN 5-RELATED 1 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1486 Acco-ChrAcco12 23929947 23934044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1486 1 430 IQD Protein Family AT4G23060 40.909 9.07e-69 224