Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1480 ATGGCTTCGTCCAGGTCAATGAACCGTTCCTCTGGCGACATCGTCGATTCAACGCCTTTTCTGGGGAATTCAGGTGGTTCTTCCGATGAGTTCAATTCCGGCCGTCGATTTGTGCGGAGACAGAGCCTGCGACAAGCTGCACGGTTCCTTAGGCAGGCTAATGGCCATAGGATGATTCGCGAGCCATCAATGATGGTTAGAGAGACTGCAGCCGAGCAACTAGAAGAGAGACAAAGCGATTGGGCTTATTCTAAACCCGTTGTGATTCTTGACATCATTTGGAATTTTGCCTTTGTTATTGCGGCCGCTACTGTGTTGGTTATGAGCAGAAATGAAAAGCCAAGCGTGCCTTTGAGGTGGTGGATTTCGGGTTATGCTATCCAATGCGTCCTTCACGTATTCTGTGTCTGCCTTGAGTACAGGAGGCGGAGGCGGAACCAACAGAGTCAATCCCCGCCATCCTTGAACTCGGTGCTAAGGTCTGGAAGCAGTGACAATTCGAGTTCCGGTTCAAGGGAGAATTCTGGGCATTATGAGAGTTTGCCGCAATTTCATGAGGAGGGTACAAGTAGCACTGCAAAGCATCTGGAATCAGCCAATACAATGTTTTCATTTGTTTGGTGGATCATTGGATTTTACTGGGTTTCCTCTGGTACTCAAGCTTTAGCTAATGATTCTCCTCAGCTTTACTGGCTATGCATTCTTTTCCTGGCTTTTGATGTTTTATTTGTCATTTTCTGCGTTGCACTGGCGTGCATTATTGGCATTGCTGTTTGCTGTTGTCTTCCATGTATCATTGCTCTTCTTTATGCAGTTGCAGACCAGGAAGGTGCAACAAAGCAAGACCTCGAGCAGTTGTCAAAATTCAAATTCCGTAGAATAGAAGATGAGAAAGTTGCCGGTAGCACAGAAGAATCTGTGGGAGGTGTGATGACTGAATGTGGATCTGATTTACCCACTGAACGTGTTCTTTCCGAGGAGGATGCGGAATGTTGCATCTGCCTTTCTGCTTATGAGGATGGGGTTGAACTAAGAGAACTTCCTTGTGGTCACCATTTTCATTGTACCTGCGTTGACAAGTGGCTGTACATAAACGCGACTTGCCCGCTTTGCAAGTATAATGTTTTGAAGGGTAGCAGCTATGGTCAAGAGGAGATTTAG 1161 0.4651 MASSRSMNRSSGDIVDSTPFLGNSGGSSDEFNSGRRFVRRQSLRQAARFLRQANGHRMIREPSMMVRETAAEQLEERQSDWAYSKPVVILDIIWNFAFVIAAATVLVMSRNEKPSVPLRWWISGYAIQCVLHVFCVCLEYRRRRRNQQSQSPPSLNSVLRSGSSDNSSSGSRENSGHYESLPQFHEEGTSSTAKHLESANTMFSFVWWIIGFYWVSSGTQALANDSPQLYWLCILFLAFDVLFVIFCVALACIIGIAVCCCLPCIIALLYAVADQEGATKQDLEQLSKFKFRRIEDEKVAGSTEESVGGVMTECGSDLPTERVLSEEDAECCICLSAYEDGVELRELPCGHHFHCTCVDKWLYINATCPLCKYNVLKGSSYGQEEI 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1480 386 CDD RING-H2_RNF6-like 330 372 - -
Acco12g1480 386 MobiDBLite consensus disorder prediction 1 31 - -
Acco12g1480 386 Pfam Ring finger domain 330 372 IPR001841 -
Acco12g1480 386 ProSiteProfiles Zinc finger RING-type profile. 331 372 IPR001841 -
Acco12g1480 386 FunFam E3 ubiquitin-protein ligase At1g12760 317 382 - -
Acco12g1480 386 PANTHER TARGET OF ERK KINASE MPK-1 51 377 - -
Acco12g1480 386 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 315 379 IPR013083 -
Acco12g1480 386 MobiDBLite consensus disorder prediction 148 185 - -
Acco12g1480 386 MobiDBLite consensus disorder prediction 1 32 - -
Acco12g1480 386 SMART ring_2 331 371 IPR001841 -
Acco12g1480 386 SUPERFAMILY RING/U-box 321 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1480 Acco-ChrAcco12 23763701 23774797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1480 24 379 C3H Transcription Factor Family AT1G68070 49.861 1.95e-117 343