Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1441 ATGGGATCCACTTCGACGGCCAAGTTAACGGAGCAAAATTATTGGAGATGCATCAGCAACTTCAACTTCCAGTGCTGCGGAAACCTGTCGCCGGAGCAACACTATCCGTCGATGACGAGATTTCCGAGAGGCTCCTCGCCGGAGGAGGTGTTGAGTTCGCCGGAGGCTAAAGCAGCTTTCAACGTCACCGGAATGACGTGCGCTGCCTGTGCTGGATCGGTGGAGAAAGCCGTCAAACGCCTCCCTGGAATTCGCAACGCCGTCGTCGATGTCTTGAACGGTAAAGCGCAGGTTTGTTATTTTCCGGCGATGGTTACTGAGGAGAGAATAAGGGAGGCAATTGAAGATGCTGGATTTGAAGCAAAATCCATTGAAGAAGAATCAATAAAAGAGAAGCCTTCTCAAATCTGCAGAATACACATAAAGGGTATGACTTGTACTTCTTGCTCGTCCACTGTTGAATCCCTTCTTCAAGCCATTCCTGGAGTTCAAAAATCACAAGTGGCCTTGGCAACTGAAGAAGCTCAAGTCCATTATGATCCAAAAATTGTCACCTACAATCACCTAAAGGAAGCCATTGAAGAAGCAGGATTTGAAGCCATACTGAAAAGCACAGGTGAACACATAAGCAAAATAGAGTTGAAAATTGAAGGCCTAAAAACTGATCAGTCCTTGAGGGAGATTCGAAAGTCTCTCCAGTCACTTCCAGGAGTTGAAAACATAGACATTAATCAAGAAATGAAGAAAGTTTCCATTTCTTATAAACCATACATGACAGGACCCAGAACTTTCATTGAAGTCATAGAATCATCTTCAGGATCTGGGTGTTTCAGGGCCATGATATTTCCTGATGGAGGAGAAAGAAGAGAGACTCATAGGCAAGAGGAAATCAAGAGACACTTCAAGATATTCATATGGAGTTTATCTTTCTCCGTTCCTGTATTTCTAGCCTCCATGGTCCTTATGCATATTCCTGGAATTATTCATGTTTTAGGTATGAAGGTGGTGAACAATTTAACTATTGGACTCATTGTGAGGTGGGAATTTTCGACCCCGGTACAGTTCTACATAGGAAGAAGATTCTACATTGGGGCTTACAAATCTTTGCGCAATGGTTCGGCTAACATGGACGTATTGATCGCCTTGGGAACAAACACGGCTTACTTCTATTCTGTTTATGTTGCAGTTAGAGCTGCTTTTTCCAGAGACTTCATGGGCAGTGATTTTTTTGAGACCAGTTCTATGCTTATCTCATTTATTCTTTTAGGCAAGTATCTGGAAGTGTTGGCCAAGGGAAAGACATCACAAGCCATTGCCAAACTCATGGAATTGACTCCTGACACAGCAATATTGTTAAGTCTAAATGAGGAAGGCAATAATGTAACAAATGAACAGCAAATAGATAGCAGGTTGATACAAAAAGATGATGTGATAAAGATCGTACCTGGCGCCAAAGTAGCATCAGACGGTTTCGTGATTTGGGGACAGAGTTACATAAATGAGAGCATGATAACGGGAGAAGCCAGGCCAGTGGCAAAGAGGAAAGGTGACATGGTCATTGGAGGCACTGTGAATCTCAATGGCGTTTTGCATGTGAAGGTGACAAGAGTTGGATCAGAGAGTGCTCTCTCGCAGATTGTTCGGCTTGTTGAATCAGCTCAGATGGCTAAAGCTCCGGTTCAGAAGCTAGCAGACCGAATTTCCAAATACTTTGTGCCACTGGTTATAATGCTTTCTCTTGCAACTTGGGTCTCCTGGTTCATAGCTGGACAACTACATGCATATCCGGAATCTCAGATTCCATCCTCCATGAACAGCTTTGAGCTTGCACTTCAGTTTGGGATCTCTGTGATGGTCATAGCCTGTCCTTGTGCTCTAGGCCTAGCCACTCCTACAGCTGTCATGGTTGGTACTGGAGTTGGTGCAACTCAAGGCGTGTTGATCAAAGGTGGCCAAGCATTAGAAAAGGCACATAAGGTGAATTGCATCGTCTTTGATAAGACGGGAACTCTAACAGTTGGGAAGCCAATCGTTGTTACCACAAAACTCTTCAAGAAGATAACTCTCCCAGATTTCTACAAATTTGTTGTTGCCATTGAGGTGAACAGTGAGCACCCAATAGCCAAGGCCATTGTTGAGCATGCTGAGAAAGCTGCAGAAGGTAATGAAAAGAACCCTGCATGGCCAGAGGCACGTGACTTTGTTTCCATTTCAGGCCATGGAGTGAAGGCCATAGTTCAAGACAAGGAAATAATAGTTGGGAATAAGAAGTTGATGCAGGAACATAACATAGTCATTCCAGTGGATGCTGAAGAAACACTAGCAGAGGCTGAAAGGTTGGCACAAACTGGGATTCTAGTTTCCATAGATAGAGAAATTGCAGGAGTTCTAGCAATATCTGACGCGTTGAAACCAAGTGCCAAAGAAGTCATTTCCATTCTTAATTCAATGAAAATCAAGAGCGTCCTCGTGACAGGTGATAACTGGGGAACTGCAAACTCCATTGCCAGACAAGTTGGGATTGAAACTGTCATAGCTGAAGCACAGCCTGAGGTTAAAGCAGACAAAGTAAAAGAATTGCAGACTTCTGGTTACACCGTGACAATGGTGGGAGACGGTATCAATGATTCGCCGGCGCTTGTGGCGGCTGATGTGGGAATGGCAATTGGTGCTGGCACAGATATTGCTATTGAGGCAGCTGACATAGTGCTAATGAAGAGCAACTTAGAAGACATAATAATTGCCATTGATCTTGCCAAGAAAACTTTCTCCAGGATTCGTCTCAACTACATTTGGGCTCTGGGATACAATCTGCTGGCAATTCCAATAGCTGCCGGAATCCTTTACCCATCTTCTGAATTCCGGTTACCGCCATGGATCGCCGGGGCTGCAATGGCAGCATCTTCCGTCAGTGTTGTCTGCTCCTCCCTCTTGTTGAAGAAGTACAGAAGACCCCAGAAGCTGAATAACCTGGACTTAAACGGTATTAAGATTGAATAA 3000 0.4433 MGSTSTAKLTEQNYWRCISNFNFQCCGNLSPEQHYPSMTRFPRGSSPEEVLSSPEAKAAFNVTGMTCAACAGSVEKAVKRLPGIRNAVVDVLNGKAQVCYFPAMVTEERIREAIEDAGFEAKSIEEESIKEKPSQICRIHIKGMTCTSCSSTVESLLQAIPGVQKSQVALATEEAQVHYDPKIVTYNHLKEAIEEAGFEAILKSTGEHISKIELKIEGLKTDQSLREIRKSLQSLPGVENIDINQEMKKVSISYKPYMTGPRTFIEVIESSSGSGCFRAMIFPDGGERRETHRQEEIKRHFKIFIWSLSFSVPVFLASMVLMHIPGIIHVLGMKVVNNLTIGLIVRWEFSTPVQFYIGRRFYIGAYKSLRNGSANMDVLIALGTNTAYFYSVYVAVRAAFSRDFMGSDFFETSSMLISFILLGKYLEVLAKGKTSQAIAKLMELTPDTAILLSLNEEGNNVTNEQQIDSRLIQKDDVIKIVPGAKVASDGFVIWGQSYINESMITGEARPVAKRKGDMVIGGTVNLNGVLHVKVTRVGSESALSQIVRLVESAQMAKAPVQKLADRISKYFVPLVIMLSLATWVSWFIAGQLHAYPESQIPSSMNSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGATQGVLIKGGQALEKAHKVNCIVFDKTGTLTVGKPIVVTTKLFKKITLPDFYKFVVAIEVNSEHPIAKAIVEHAEKAAEGNEKNPAWPEARDFVSISGHGVKAIVQDKEIIVGNKKLMQEHNIVIPVDAEETLAEAERLAQTGILVSIDREIAGVLAISDALKPSAKEVISILNSMKIKSVLVTGDNWGTANSIARQVGIETVIAEAQPEVKADKVKELQTSGYTVTMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDIIIAIDLAKKTFSRIRLNYIWALGYNLLAIPIAAGILYPSSEFRLPPWIAGAAMAASSVSVVCSSLLLKKYRRPQKLNNLDLNGIKIE 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1441 999 ProSitePatterns Heavy-metal-associated domain. 141 170 IPR017969 GO:0046872
Acco12g1441 999 PRINTS P-type cation-transporting ATPase superfamily signature 500 514 - -
Acco12g1441 999 PRINTS P-type cation-transporting ATPase superfamily signature 664 678 - -
Acco12g1441 999 PRINTS P-type cation-transporting ATPase superfamily signature 893 905 - -
Acco12g1441 999 PRINTS P-type cation-transporting ATPase superfamily signature 817 827 - -
Acco12g1441 999 PRINTS P-type cation-transporting ATPase superfamily signature 795 806 - -
Acco12g1441 999 PRINTS P-type cation-transporting ATPase superfamily signature 870 889 - -
Acco12g1441 999 CDD HMA 141 200 IPR006121 GO:0046872
Acco12g1441 999 SUPERFAMILY Calcium ATPase, transduction domain A 464 550 IPR008250 -
Acco12g1441 999 SUPERFAMILY Calcium ATPase, transmembrane domain M 412 655 IPR023298 -
Acco12g1441 999 CDD HMA 60 122 IPR006121 GO:0046872
Acco12g1441 999 Pfam Heavy-metal-associated domain 60 120 IPR006121 GO:0046872
Acco12g1441 999 Pfam Heavy-metal-associated domain 217 270 IPR006121 GO:0046872
Acco12g1441 999 Pfam Heavy-metal-associated domain 139 199 IPR006121 GO:0046872
Acco12g1441 999 SFLD p-type atpase 646 921 IPR044492 -
Acco12g1441 999 Gene3D - 631 927 IPR023214 -
Acco12g1441 999 PRINTS Copper-transporting ATPase 1 signature 57 82 - -
Acco12g1441 999 PRINTS Copper-transporting ATPase 1 signature 159 180 - -
Acco12g1441 999 PRINTS Copper-transporting ATPase 1 signature 83 106 - -
Acco12g1441 999 Pfam haloacid dehalogenase-like hydrolase 660 884 - -
Acco12g1441 999 CDD P-type_ATPase_Cu-like 304 966 - -
Acco12g1441 999 SUPERFAMILY HMA, heavy metal-associated domain 207 270 IPR036163 GO:0046872
Acco12g1441 999 FunFam Copper-transporting ATPase 1, putative 431 554 - -
Acco12g1441 999 Gene3D - 431 554 - -
Acco12g1441 999 NCBIfam copper ion binding protein 57 121 IPR006122 GO:0005507
Acco12g1441 999 NCBIfam copper ion binding protein 139 200 IPR006122 GO:0005507
Acco12g1441 999 Gene3D - 671 749 IPR023299 GO:0000166
Acco12g1441 999 Gene3D - 750 801 IPR023299 GO:0000166
Acco12g1441 999 SUPERFAMILY HAD-like 663 976 IPR036412 -
Acco12g1441 999 ProSitePatterns E1-E2 ATPases phosphorylation site. 666 672 IPR018303 -
Acco12g1441 999 SFLD C1.7: P-type atpase like 646 921 - -
Acco12g1441 999 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 26 993 - -
Acco12g1441 999 PRINTS Copper-transporting ATPase signature 943 957 - -
Acco12g1441 999 PRINTS Copper-transporting ATPase signature 413 432 - -
Acco12g1441 999 PRINTS Copper-transporting ATPase signature 361 380 - -
Acco12g1441 999 PRINTS Copper-transporting ATPase signature 433 451 - -
Acco12g1441 999 PRINTS Copper-transporting ATPase signature 647 662 - -
Acco12g1441 999 PRINTS Copper-transporting ATPase signature 847 864 - -
Acco12g1441 999 ProSiteProfiles Heavy-metal-associated domain profile. 135 201 IPR006121 GO:0046872
Acco12g1441 999 SUPERFAMILY HMA, heavy metal-associated domain 53 127 IPR036163 GO:0046872
Acco12g1441 999 FunFam Copper-transporting ATPase HMA5 134 205 - -
Acco12g1441 999 Gene3D - 204 276 - -
Acco12g1441 999 Gene3D - 133 203 - -
Acco12g1441 999 ProSitePatterns Heavy-metal-associated domain. 62 91 IPR017969 GO:0046872
Acco12g1441 999 NCBIfam heavy metal translocating P-type ATPase 376 979 IPR027256 GO:0006812|GO:0016020|GO:0019829
Acco12g1441 999 FunFam Probable copper-transporting ATPase HMA5 778 927 - -
Acco12g1441 999 FunFam Copper-transporting ATPase HMA5 55 126 - -
Acco12g1441 999 ProSiteProfiles Heavy-metal-associated domain profile. 210 276 IPR006121 GO:0046872
Acco12g1441 999 NCBIfam HAD-IC family P-type ATPase 416 948 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco12g1441 999 ProSiteProfiles Heavy-metal-associated domain profile. 56 122 IPR006121 GO:0046872
Acco12g1441 999 Gene3D - 56 128 - -
Acco12g1441 999 Pfam E1-E2 ATPase 463 642 - -
Acco12g1441 999 SUPERFAMILY HMA, heavy metal-associated domain 134 207 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1441 Acco-ChrAcco12 22683073 22694787 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1441 51 999 Primary Pumps ATPases AT1G63440 71.293 0.0 1409