Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1436 ATGAGATTATGGAGTTCATCGTTGTTTATCGGTTTGATTTCCATCGTCCCTTTCGTGGCTTGTGATAATGTTGTGGCCTCCAAAGAAGTTTTGGCGCTTAATGCTTTCAAAGAAGCTATTTATGAAGATCCATTTCAAGTTTTGTCCAATTGGAATACGATGAATTCAGATCCTTGTGACTGGAATGGCGTTTTCTGCAATCCTGCCCGAGATCATGTTGTTAAGCTAAACATTTCGAGTTCATCCTTAAAGGGATTTCTAGCACCAGAATTGGGACGAATCACCTACTTGGGAGAATTGATTTTGCACGGCAATAAACTGATTGGAACTATACCTAAAGAGCTGGGCTTGTTGAAATCTCTTAAGGTCTTGGATTTGGGGATGAATCGGCTATCAGGACCAATTCCTCCAGAGATTGGAAATTCAACCCTATTAGTGAAAATAAACCTTCAGTCCAACGGGTTGACTGGTAGACTACCTCCAGATCTTGGAAATTTGAAATACCTTCAAGAACTGATGCTGGATAAGAATAAGCTTCAAGGGCCTGTCCCTGCTGATAGCAGTTCAGATTTTACGACAAATATGCGTGGAATGTATGCATCAAATGCAAATTTAACTGGTTTCTGTCGTTCGTCTCTGTTAAAAGTTGCAGATTTTTCCTATAACTTCTTTGTTGGGAGCATCCCAAAATGCTTGATGTATCTTCCAAGGTCTAGCTTTCAAGGGAATTGCCTCCAGATCAAGGATTTGAAGCAACGCCCTTCTGTGCAGTGTGCTGGTGCTTCACCTGCCAGCAGCCATCCAGTGATCAACTCAAAGCACCGACCAGCTGATTATGTGTCCAAGCATCAAGGGGCATCAAAATCTGCTTGGCTTTTGGCTATAGAAATAGTGACTGGAACCATGATCGGTTCTCTCTTTTTAGTTGCTCTTCTAACTGCCTTTCAGAGGTTTAACAACAAACCGTCCATCATTATTCCTTGGAAGAAATCTGCAAGCGAGAAGGAGAATTTGGAAGTATATATAGACTCTGAGATGTGGAAAGATGTAAGGAAGTATAGCCGACAAGAGCTTGAAGTGGCTTGCGAAGATTTCAGCAACATCATTGGGTCCTCACCTGACAGTGTGGTCTACAAGGGCACCATTAAAGGTGGGCCTGAGATTGCTGTGATTTCCCTCTGCATTAAGGAGGAGAACTGGACAGGTTACCTCGAGCTCTATTTTCAGAGAGAGGTGGCGGACTTGGTGAGGCTAAATCATGACAATATAGGAGAACTTCTGGGATATTGTAGAGAGAGCACTCCATTTACAAGGATGCTGGTTTTTGAATATGCTTCAAATGGGACACTTTCTGAGCACCTACATTATGGAGAAGGATGCCAGTTATCATGGACAAGGCGTATGAATATTGTTATAGGCATTGCTCGTGGTCTCAAATATCTACACACAGAAGTTGAGCCTCCATTCACTATGTCGGATCTAAATTCTGGTGCTGTATATCTAACAGAAGATTTTTCCCCTAAGCTCGTTGATTTTGAAAGCTGGAAGACAATCCTGGAAAGATCAGAAGGGAATTCTGGTTCTGTTGGCAGCCAAGGTGCCGTTTGTGTTCTTCGAAATTCCATTGAAGCACGCCATCTTGATATCCAAGGAAACATATATGCTTTTGGGGTACTTCTACTTGAAATAGTCAGCGGAAGATCTCCCTATTGCAAGGACAAGGGTTACTTGGTGAATTGGGCGATGGACCATCTTGAAAATCCAGAAGAAACGACGTCTTTGGTGGATCCCGAATTGAAACATTTTAGAGATGAAGACCTGAAAGTAATATGTGAGGTAATAAATCTCTGTATCAAATCTGATCCCACAAGACGCCCAGGGATGAAAGAGTTGTGTAGTATTCTGGAGAGCAGAATCGACACATCCATAACTTCAGAGCTCAAGGCATCTTCTTTGGCTTGGGCTGAACTTGCCCTCTCATCTTGA 1986 0.4255 MRLWSSSLFIGLISIVPFVACDNVVASKEVLALNAFKEAIYEDPFQVLSNWNTMNSDPCDWNGVFCNPARDHVVKLNISSSSLKGFLAPELGRITYLGELILHGNKLIGTIPKELGLLKSLKVLDLGMNRLSGPIPPEIGNSTLLVKINLQSNGLTGRLPPDLGNLKYLQELMLDKNKLQGPVPADSSSDFTTNMRGMYASNANLTGFCRSSLLKVADFSYNFFVGSIPKCLMYLPRSSFQGNCLQIKDLKQRPSVQCAGASPASSHPVINSKHRPADYVSKHQGASKSAWLLAIEIVTGTMIGSLFLVALLTAFQRFNNKPSIIIPWKKSASEKENLEVYIDSEMWKDVRKYSRQELEVACEDFSNIIGSSPDSVVYKGTIKGGPEIAVISLCIKEENWTGYLELYFQREVADLVRLNHDNIGELLGYCRESTPFTRMLVFEYASNGTLSEHLHYGEGCQLSWTRRMNIVIGIARGLKYLHTEVEPPFTMSDLNSGAVYLTEDFSPKLVDFESWKTILERSEGNSGSVGSQGAVCVLRNSIEARHLDIQGNIYAFGVLLLEIVSGRSPYCKDKGYLVNWAMDHLENPEETTSLVDPELKHFRDEDLKVICEVINLCIKSDPTRRPGMKELCSILESRIDTSITSELKASSLAWAELALSS 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1436 661 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Acco12g1436 661 PANTHER PROTEIN MALE DISCOVERER 2 21 659 - -
Acco12g1436 661 Pfam Protein tyrosine and serine/threonine kinase 367 634 IPR001245 GO:0004672|GO:0006468
Acco12g1436 661 Gene3D Phosphorylase Kinase; domain 1 335 444 - -
Acco12g1436 661 SUPERFAMILY L domain-like 28 236 - -
Acco12g1436 661 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 26 182 - -
Acco12g1436 661 SUPERFAMILY Protein kinase-like (PK-like) 340 635 IPR011009 -
Acco12g1436 661 Gene3D Transferase(Phosphotransferase) domain 1 445 651 - -
Acco12g1436 661 FunFam Inactive receptor-like serine/threonine-protein kinase 337 444 - -
Acco12g1436 661 Gene3D Ribonuclease Inhibitor 25 259 IPR032675 -
Acco12g1436 661 ProSiteProfiles Protein kinase domain profile. 363 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1436 Acco-ChrAcco12 22571765 22576255 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1436 42 640 Receptor kinase-like Gene Family AT5G45780 28.852 2.67e-59 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Acco12g1436 PK_Tyr_Ser-Thr 1.4e-21 CL0016