Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1424 ATGGATGGGAGAGAAGCTATGACATTCTCTGGTGGCTCAGCTCCATATTACATGCATAGAGGTAATGTTTCTGGGTCTGGCTCGGGAACACAAGCCCAGGGGTTCCAACAATCACGTCCTGGGTTTAGACCTTTGTCAAACGTTGGATTTCAAGCTCAATCTAATGTCCGAGGTGGTTCTTTGGGATCCACATTTTCAGTGGAGCCTCCTCGTAGCAATTTTAATCAAGCCATTAACATAAGTTCTTCTGGAGGAATACCTTCTTCAGGCGAGCCCTTGAAAAAGAAGAGAGGAAGGCCTCGTAAATATGGTCCTGATGGCCCTGTTTCTTTGGGACTGTCTCCCATGTCTGCAACTGCTAATTCTACCCCAGGTTCAGGCACACCTTCCCAGAAGCGGAATAGAGGACGTCCACCTGGTTCTGGCAGGAAGCAGCAGCTAGCGGCTCTAGGTGAATGGATGAACAGTTCGGCTGGACTAGCTTTTGCTCCTCATGTTATCACCATTGAAATTGGGGAGGACATTGTAGCAAAGATGTTGTCTTTATCACAGCAGAGACCAAGGGCTCTCTGCATCATGTCGGGCACTGGTGCAGTTTCTTCTGTCACTCTACGCCAACCTGCTTCAACAAACATCAGTCTCACTTATGAGGGCCGATTTCAAATTTTATGCTTGTCAGGCTCATACTTGGTTGCTGAAGATGGTGGTCCTCGCGATAGAACAGGGGGTTTGAGTGTTTCTCTTTCTAGCCCTGATGGTCAAGTTATTGGTGGCGGTGTTGCTGTTCTTATTGCCGCAAGCCCAGTTCAGGTGGTGGTGTGCAGTTTTGTATATGGAAGCGCTAAGATGAAGACAAAGCAATTAACCTCTCCAAAGGCTGAGAAGAATTCTGAGCCTAAGATTCAGACTCAAACTCAGCCTCATCCTCAGCGTGATGCTAACAAGTTAAATAGCCCCATTACTCCAGCAAGTGCTCAGAACTACACATTATCTGCATCAGCCATGTGGCCAGGAGACCTGAAAGGCTCTCACACACATTCTCATACTGGTATCGACTTGACCCGCGGCTGA 1071 0.479 MDGREAMTFSGGSAPYYMHRGNVSGSGSGTQAQGFQQSRPGFRPLSNVGFQAQSNVRGGSLGSTFSVEPPRSNFNQAINISSSGGIPSSGEPLKKKRGRPRKYGPDGPVSLGLSPMSATANSTPGSGTPSQKRNRGRPPGSGRKQQLAALGEWMNSSAGLAFAPHVITIEIGEDIVAKMLSLSQQRPRALCIMSGTGAVSSVTLRQPASTNISLTYEGRFQILCLSGSYLVAEDGGPRDRTGGLSVSLSSPDGQVIGGGVAVLIAASPVQVVVCSFVYGSAKMKTKQLTSPKAEKNSEPKIQTQTQPHPQRDANKLNSPITPASAQNYTLSASAMWPGDLKGSHTHSHTGIDLTRG 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1424 356 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 59 326 IPR039605 GO:0003680
Acco12g1424 356 CDD DUF296 164 276 IPR005175 -
Acco12g1424 356 Gene3D - 164 295 - -
Acco12g1424 356 ProSiteProfiles PPC domain profile profile. 156 297 IPR005175 -
Acco12g1424 356 MobiDBLite consensus disorder prediction 114 135 - -
Acco12g1424 356 MobiDBLite consensus disorder prediction 1 146 - -
Acco12g1424 356 MobiDBLite consensus disorder prediction 336 356 - -
Acco12g1424 356 MobiDBLite consensus disorder prediction 294 322 - -
Acco12g1424 356 Pfam Plants and Prokaryotes Conserved (PCC) domain 164 277 IPR005175 -
Acco12g1424 356 MobiDBLite consensus disorder prediction 23 88 - -
Acco12g1424 356 MobiDBLite consensus disorder prediction 287 322 - -
Acco12g1424 356 SUPERFAMILY AF0104/ALDC/Ptd012-like 162 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1424 Acco-ChrAcco12 22133435 22137492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1424 1 356 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 49.742 2.38e-97 292