Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1413 ATGGTGCCAGAAAACATGAAGAAACAACTTGCTTTGGCTGTGAGGAGCATCCAGTGGAGCTATGCCATATTCTGGTCTGCTTCTAGTAGCCAACCCAGGGTTTTGAAATGGAATGAGGGATATTACAATGGCGACATAAAGACTAGGAAAACAAGTCAGGCGGCACAACGTAGTTCAGAACAAATAGGTTTGCAGAGGAGTGAGATGTTGAGAGAGCTATTTGAGTCCCTTGCAACTGCAGAATCCGCCACCACACAAATTAAAAGGCCTTCATCGAATGCACTAAGCCCCGAAGAACTCACCGGTGCAGAGTGGTATTACTTGGTTTGCATGTCCTTTGAATTCAATATTGGCCAAGGATTACCTGGACGAAGTCTGGCAAATGGCCAACCTATTTGGGTTTTTGAGGCCCCTCGTGCTGATGCTAGAGTTTTTAGTCGCTGTCTGCTCGCAAAGACTGTGGTATGCTTCCCTTTTCTGGAAGGTGTTGTTGAGCTGGGGACGAGTGATCTGATCTCTGAAGATCTCAGTCTCATTCAGCATATAAAAAATTCTTTCCTGGATATTCTGAATTCCAATGTGTCTATAGCATTTGGCCTCAGTGCCTATGATGACAAATTACCAGAAGTGGGATATGATGTAAACAACAAAAGTTTTGCCTATAGTTCAACTGCGATTGAAGCAAACTGGCCAGCAGATGAGACACATATGGTTGAAAGAATAAACGGTGGTGCTTCTCAGGTCCAAAGCTGGCAAGTTATGGATGATGAATTGAGTAATGATGCCCATAACTCAATGACAACTAGTGACTGTAGTTCTCAAACTCTTGCTGATCCTGAAAAGACTGCCTCTGTTCCCAAGGATCAAAACCCAACTGACCATTCTGTGCAAGACCTCCAAGAGGGGCATTATCAAAAAGTTCTTTCAGCAGTTCTAAAAGATTCAGACCCATTAGCTATTAGAGAGCATTTTCTAAGTAGTGACAAGGAATCCAGCTTTGTTGGTTGTAAGAAAGGAGAATCGATGAGTTGTCAAATGCTAACAGGAGGAGGAACCCCACAGAAGTTGTTGAAGAAGGTATTGTTCGAAGTTCCTCGGATGCATATGGACGTGCTTCTTGAAATCCAAGAAGAAAATGATTACAAAGAGAGAATGAGACCTGAGATTGATGAAATTGGCATGAACCATGTGTTGTCAGAAAGAAGGAGAAGGGCGAAACTAAATGAAAGGATCTTAACCCTTAGATCAATGGTCCCTTCAGTTAGTAAGGATGACAAAGTTTCAATACTAGACGATGCAATCAAATACCTTAGGAAGCTCGAGAAGAAGGTTAGAGAACTGGAAGCATGTAGGGAGCTAATAGATTTAGAAACAAAAGCTGAAAGAACACCTCAAGATATGGTAGAGAGGACTTCTGATAATTATTTTAACAAAACTGATAATGGCATGAAGTCGATGAATAACAAGAGAAAGGCATGTGAGATTGAAGAAGAGACATGGCTAGAGAATGATTCATTTGCTCTAAATGACAGTGCTACAAGTAGCTTGACTATCAGTTTGAGCAACAGTGATGTTCTGATTGAAGTGAAATGTCCGTGGAGGGAAGGCATAGTGATGAAAATTATGGAAGCACTTAAGAGTTTCCACGTGGATTTACGATCAATTCAGTCATCAGAAGCTGATGGGATTCTTCATCTGACCATGAGATCCCAGGTAAGCAAACAATTCACTGTGAAAACATCTTGTTCCCAGAAGAACATGACTAACTAA 1770 0.4158 MVPENMKKQLALAVRSIQWSYAIFWSASSSQPRVLKWNEGYYNGDIKTRKTSQAAQRSSEQIGLQRSEMLRELFESLATAESATTQIKRPSSNALSPEELTGAEWYYLVCMSFEFNIGQGLPGRSLANGQPIWVFEAPRADARVFSRCLLAKTVVCFPFLEGVVELGTSDLISEDLSLIQHIKNSFLDILNSNVSIAFGLSAYDDKLPEVGYDVNNKSFAYSSTAIEANWPADETHMVERINGGASQVQSWQVMDDELSNDAHNSMTTSDCSSQTLADPEKTASVPKDQNPTDHSVQDLQEGHYQKVLSAVLKDSDPLAIREHFLSSDKESSFVGCKKGESMSCQMLTGGGTPQKLLKKVLFEVPRMHMDVLLEIQEENDYKERMRPEIDEIGMNHVLSERRRRAKLNERILTLRSMVPSVSKDDKVSILDDAIKYLRKLEKKVRELEACRELIDLETKAERTPQDMVERTSDNYFNKTDNGMKSMNNKRKACEIEEETWLENDSFALNDSATSSLTISLSNSDVLIEVKCPWREGIVMKIMEALKSFHVDLRSIQSSEADGILHLTMRSQVSKQFTVKTSCSQKNMTN 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1413 589 SMART finulus 397 446 IPR011598 GO:0046983
Acco12g1413 589 Coils Coil 430 457 - -
Acco12g1413 589 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 391 440 IPR011598 GO:0046983
Acco12g1413 589 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 394 454 IPR036638 GO:0046983
Acco12g1413 589 Gene3D - 391 452 IPR036638 GO:0046983
Acco12g1413 589 Pfam Helix-loop-helix DNA-binding domain 395 441 IPR011598 GO:0046983
Acco12g1413 589 MobiDBLite consensus disorder prediction 260 295 - -
Acco12g1413 589 PANTHER TRANSCRIPTION FACTOR TT8 2 580 - -
Acco12g1413 589 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 6 186 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1413 Acco-ChrAcco12 21737030 21740101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1413 2 568 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 44.463 7.90e-155 455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco12g1413 bHLH-MYC_N 8.6e-44 CL0161