Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1408 ATGTCTTCTGATCTTTATGCTTTTGAAGCTCCTTTCCACACTTCTTCAACCTCAGAATTCCTCTCCAATGGAGGCCATGACCTTCCCTTCCTTTCCTATGCTCCTTGCTATTTTCCACTCCACCAAGAAAAAGAACCAGAAGAATCTCTTACTCAAGATCCATTTTCTCCATCTTTCTTCTCCTTCTCTCCTCCAAGCACCTTCCTTCAAAATCTCAGCCTTCACCACCATTCCAAAACCATCCTCGCTGATCTTCCAAACCCAGAAACAGAGTTAAAAAATTCCTCTATTCTTGACAATAACTTAGAAGAATCCAACATTTTTCCCAGTTTGGATTATAGCCATGGCCAGAACCGGGTGTCTCAGAGTTACAGCAACAGAGATTCTGAAAATGTGGCCCAATTCCTTATGCAAAGGAGCTTCAGCAGTAAATCGTTTGATGGTAAACCCAGTTTTCTGTTCCAACCTCATCCCTATGAAACTTCATTTATTCAAAATCAATCCTTGACCTCACCAGATCACACTTTCTTCATTCCTCAAATGAGAAGAGTATGCAGTACTGGAGATTTGCAGAAAATCCAAGGAACTCAGACCTCAAATACTGAAGAAACAAGCTTCAAAGTTGGTCGTTACAGTACAAAAGAAAGGAAGGAGAGAATCTCTAAATATAGAGCCAAGAGAAGCCAGAGGAACTTCAACAAAACCATCAAGTACACATGCAGAAAGACATTGGCAGATAATAGACCCCGCATACGTGGAAGATTCGCGAGAAACGATGAGACCATGGAGATTGCGAATCCCAAAGCTCCATTTTCAATCAGAGATGAAGACGAAGATGTTTTCTGGATTGAAGAATTGAATGAAGAGGCAGAGGATGAAACGGTGAGAACTGTAAATAGCTTTGGACCTTTCTCAGAGTTTCAGTACTACGGGATTCGAGAAGAGCAGCAGCGCTTTTATAAGGGAGAGCAAGGAGGGGAATTACATTTAAAGACCCGATGTTAA 1005 0.4149 MSSDLYAFEAPFHTSSTSEFLSNGGHDLPFLSYAPCYFPLHQEKEPEESLTQDPFSPSFFSFSPPSTFLQNLSLHHHSKTILADLPNPETELKNSSILDNNLEESNIFPSLDYSHGQNRVSQSYSNRDSENVAQFLMQRSFSSKSFDGKPSFLFQPHPYETSFIQNQSLTSPDHTFFIPQMRRVCSTGDLQKIQGTQTSNTEETSFKVGRYSTKERKERISKYRAKRSQRNFNKTIKYTCRKTLADNRPRIRGRFARNDETMEIANPKAPFSIRDEDEDVFWIEELNEEAEDETVRTVNSFGPFSEFQYYGIREEQQRFYKGEQGGELHLKTRC 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1408 334 ProSiteProfiles CCT domain profile. 216 258 IPR010402 GO:0005515
Acco12g1408 334 Pfam CCT motif 216 258 IPR010402 GO:0005515
Acco12g1408 334 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 119 276 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1408 Acco-ChrAcco12 21601926 21603291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1408 195 263 C2C2-CO-like Transcription Factor Family AT5G24930 42.029 1.02e-10 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Acco12g1408 CCT 1.3e-17 CL0281