Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1397 ATGGCCAAGCCTTACAGAGAGAGGCCATCTTCTTCGGCACGCACCAACCTCGCCTCGTGTCTCGTCGCAACAATCTTCTTGATTTTCCTTCTTATCGCCATCCTTGTCGTTTACTTCACAGTCTTCAAGCCTCAAGATCCCAAGATCTCCATCAGCGCCGTCCAGCTTCCCTCCTTCTCCGTCTCTAACGGCTCCGTCAGTTTCACCTTCTCCCAGAACGCCTCCGTCAGAAACCCCAACAGAGCCCTCTTCTCTCACTATGATAGCTCTCTTCAGCTTCTCTACTCCGGCAGCCAGGTCGGCTTCATGTTCATCCCCGCCGGCTACATCGACGCCGGAAGTACCAAACGCATGGCCGCCACTTTCTCCGTTCAGTCTTTTCCCTTATCCAGCCCCTCCTCCTCAGCCGCCGGTGGGTTCAGTGAAGTAAGGGTCGGATCCACCATGGAGATCGAGTCCAGGATGCAGATGGCGGGTCGGGTCAAGGTGTTGTACTTGTTCAGCCATCGCTTGATGGCCAAGGCTCGTTGCAGAGTCGCCATAGGCGTGAGCGATGGCTCCGTTTTAGGTCTTCACTGCTAA 582 0.5533 MAKPYRERPSSSARTNLASCLVATIFLIFLLIAILVVYFTVFKPQDPKISISAVQLPSFSVSNGSVSFTFSQNASVRNPNRALFSHYDSSLQLLYSGSQVGFMFIPAGYIDAGSTKRMAATFSVQSFPLSSPSSSAAGGFSEVRVGSTMEIESRMQMAGRVKVLYLFSHRLMAKARCRVAIGVSDGSVLGLHC 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1397 193 Pfam Late embryogenesis abundant protein 74 176 IPR004864 -
Acco12g1397 193 SUPERFAMILY LEA14-like 27 129 - -
Acco12g1397 193 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 9 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1397 Acco-ChrAcco12 21255963 21256544 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1397 43 187 SNARE and Associated Proteins AT1G32270 23.810 1.92e-06 45.4