Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1391 ATGGCTGGTGAGTTGTGTGAAGACAAATCGAGGGAGATGGTATCATCGTCGGCTGGATTCTGCTACTCCGAGGTATCAACGGGCAACCCGACGGCGATCCAAACCCATATGGGGAATCATCATCATAATCAGATCCAAGTGTTTGAACCCGACCCGGCGGACATGTTCAACCTCACAACCAGCATGGACATGATTGGCTTCCCCAACAAGAATATTCACCACCACCATAGCACTGAAAGTAGCAACCTCGTTTGGAAAAGCTTCCTGGGTAAACCCACCACTCATCACCACCACCACCACAATCCGGCTGGTCCTTCTTCTTCTTCCTCCAAGACGGCGACCACCATGAATAATAATGAGTCTGGCTCCATCAATTTCTATCATCACTACACTAAAACAGATTTCACTTCCAGCGAAAATCTGATTGTGGGAGAAGCTCATAATCATCATCATGATTCTTCTTCTGCCTCTTGGCAAGATAACAGGTTACTTGTGGATGATTCTTCTTTAAGGTGTGTGTTCCCTTGTGAAGGAAACGAAAGGCCAAGTCAAGGCCTTTCTCTCTCTCTGAGTTCCAATAATCCCTTAAGCATTGGATTACAATCTTTTGAACTAAGACAGACCAACAACCACCAACCAGACTTTGTTTCTTCTGGAGACAAGATATTACTGGGAAAATCGATGAATCCCGAACAACAAGAAGAAGCTGGGAATAATATGTATCAAGGCCATTTTCTGCTTAAGAACTCTAAGTATTTGGTCCCTGCACAGGAACTTCTCAATGAGTTTTGCAGCCTGGGAACAAAGCAAAGTGACTTAGTGAAGCAAAAATCGACATCAAGTCAGAAAAACAAACAGTGGGAAGATGATAATAACGGAATCGGTCCCTTCAAGAAGCATCCCGTTGGCTCTCTAGAATTCATCGAATTACAGAAGAGAAAGACCAAACTACTCTCCATGCTTGAAGAGGTTGAGAGGAGATACAGGCACTACTTGAACCAAATGAAGGCAGTGGTTTCTTCGTTTGAGGCGGTGGCAGGTGCCGGTGCGGCGAGGGTTTACTCGGCGTTGGCATTGAAGGCGATGTCGAGGCATTTCAGGTGTTTGAAAGATGGGATATTGGGTCAGATAGAAGTAGCAAGGAGAGGGATGGGAGAGAAAGATCCAGTTGCACCAGGAACCACAAGAGGCGAAACACCAAGACTCAGAATCATTGACCAAACTCTCAGACAACAGAGAGCTTTCCAACAAATGAGCATGATGGAGAGCCATCCATGGCGGCCCCAACGTGGCCTCCCTGAACGATCCGTCTCAGTTCTTCGAGCGTGGCTCTTCGAGCATTTCCTTCATCCGTACCCAAGTGATATGGATAAACATATCTTAGCTCGCCAAACTGGTCTCTCAAGAAGCCAGGTTTCAAACTGGTTTATTAATGCAAGAGTGAGGCTGTGGAAGCCAATGGTGGAAGAGATGTACTTGGAGGAAATGAAGGAGCGTGAAGACAATATGGCTTCTCCTGAGGGGATCACCGATCCCGCCACTGTCGACGATGATGGCAACATCTTGGTCGGTGCTGGCAATCCGCCGCCGCCTCTGAGCACACGTCTGGTGGATCAGAAGCCGCTCCAGAACCACCGGTTGCTTCGAATAGATTCCGAGTGTGTGTCTTCTATCATAAGCAATCAGCCAGATCACCACAAAAACGAATCCACCAAGAACAATAATAATCCCCATCAAGAACATCAACAGTGTGGTGGCACATTTGGATCTGTGGAGCTTGATTTTTCATCTTACAACACTCATCACAACTCAGCAACGGGGGGCATGGTTTCTTACAGTAATGAGAATGGGAGTAATAGTAATCATCATCAGAATTATAACAATGGAGGTGTTTCTTTGACGCTAGGGTTACAGCAACACGGCGGAACTGGGGTGAGTCTGGCATTTCCTCCGCCGTCTCAGGCGTCACTGTTCTATCCAAGAGATCAAATGGAAGATTGCCAACCTGTCCAGTACTCGCTTTTGGACGGTGAAGCACAAAATCTTCCTTACAGAAATTTAATGGGCGCACAGTTGCTCCATGACTTGGCAGGATAA 2097 0.4669 MAGELCEDKSREMVSSSAGFCYSEVSTGNPTAIQTHMGNHHHNQIQVFEPDPADMFNLTTSMDMIGFPNKNIHHHHSTESSNLVWKSFLGKPTTHHHHHHNPAGPSSSSSKTATTMNNNESGSINFYHHYTKTDFTSSENLIVGEAHNHHHDSSSASWQDNRLLVDDSSLRCVFPCEGNERPSQGLSLSLSSNNPLSIGLQSFELRQTNNHQPDFVSSGDKILLGKSMNPEQQEEAGNNMYQGHFLLKNSKYLVPAQELLNEFCSLGTKQSDLVKQKSTSSQKNKQWEDDNNGIGPFKKHPVGSLEFIELQKRKTKLLSMLEEVERRYRHYLNQMKAVVSSFEAVAGAGAARVYSALALKAMSRHFRCLKDGILGQIEVARRGMGEKDPVAPGTTRGETPRLRIIDQTLRQQRAFQQMSMMESHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDMDKHILARQTGLSRSQVSNWFINARVRLWKPMVEEMYLEEMKEREDNMASPEGITDPATVDDDGNILVGAGNPPPPLSTRLVDQKPLQNHRLLRIDSECVSSIISNQPDHHKNESTKNNNNPHQEHQQCGGTFGSVELDFSSYNTHHNSATGGMVSYSNENGSNSNHHQNYNNGGVSLTLGLQQHGGTGVSLAFPPPSQASLFYPRDQMEDCQPVQYSLLDGEAQNLPYRNLMGAQLLHDLAG 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1391 698 Pfam Associated with HOX 247 373 IPR006563 -
Acco12g1391 698 MobiDBLite consensus disorder prediction 91 120 - -
Acco12g1391 698 Pfam Homeobox KN domain 443 482 IPR008422 GO:0003677|GO:0006355
Acco12g1391 698 SMART HOX_1 426 490 IPR001356 GO:0003677
Acco12g1391 698 CDD homeodomain 426 487 IPR001356 GO:0003677
Acco12g1391 698 MobiDBLite consensus disorder prediction 103 120 - -
Acco12g1391 698 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 109 511 - -
Acco12g1391 698 MobiDBLite consensus disorder prediction 560 585 - -
Acco12g1391 698 Gene3D - 429 491 - -
Acco12g1391 698 MobiDBLite consensus disorder prediction 274 289 - -
Acco12g1391 698 SMART prehox3 241 375 IPR006563 -
Acco12g1391 698 FunFam BEL1-like homeodomain protein 4 429 491 - -
Acco12g1391 698 Coils Coil 307 334 - -
Acco12g1391 698 MobiDBLite consensus disorder prediction 274 297 - -
Acco12g1391 698 SUPERFAMILY Homeodomain-like 427 492 IPR009057 -
Acco12g1391 698 ProSiteProfiles 'Homeobox' domain profile. 423 486 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1391 Acco-ChrAcco12 21076243 21079093 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1391 92 697 Homeobox Transcription Factor Family AT5G41410 44.733 4.52e-141 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Acco12g1391 POX 1.3e-46 No_clan