Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1381 ATGGAGGATGTGGACCTTGCATTGGCTGCTGCTCGGAGAGCCCTGGTAGAGAACAAGGGTAAACAATGGGCAATAACTTCTGGTTCTGTTCATGCTCTGTATTTGCAAGCTATCACTACTGAGGTAATGAAAAGAAAGTCAGAACTAGCTAAACTTGAAGCAATTAATTGCGAAAAACCACTAGATGAAGCATTATGGGACATGGATGATGTTGCTAGTAGCTTTGAGTACTATGCTGACCTTGTTGATGGATTGGATGCAAAGCAAAAGGCTCCTATATCTCTTCCCATGCAAACCTTCAAGAGTCATGTTCTTAGGGAGCCCATTAGAGTTGTTGCATTGATTACTCCGTGGAACTATCCTCTATTAATGGTTGTGTGGAAAGTTGCTCTTGCCTTAGCTACTGGTTGTACTACAATTTTGAAGCCATTTGAATTAGCATATGTGTATGTTCTTGTCAACTCATGCCAACTTGTTTGTCTTTCTACCATGTCATCATCGCTGAATTTTGAATTTTCAACAAATTGCCTTTACTGGAAGCTCTATGATTGGGAGCAAGATTATGTCAACTGCAGCTCAACTAATCAAGCTAAAGGGAAAAATAGAACACAGAAGAGGCTTCCTATATTCCAATTAGAAGCCTATGTTGCTTACTTATTCTCTCTTTTCTTGGTGAAATATTTGATATTTGTTTCTTGGCAGCCCGTTTCACTAGAGCTTGGTGGTAAAAGCCCGATTGTTGTTTTTGAGGATGTTGACCTTAATAAAGAAGCTGTTGAATGGACCATGTTTGGTTGTTTCTGGACAAATGGTCAGATTTGTGCTGCCACTACCCATCTTATTATACATGTGGTTTAA 858 0.3963 MEDVDLALAAARRALVENKGKQWAITSGSVHALYLQAITTEVMKRKSELAKLEAINCEKPLDEALWDMDDVASSFEYYADLVDGLDAKQKAPISLPMQTFKSHVLREPIRVVALITPWNYPLLMVVWKVALALATGCTTILKPFELAYVYVLVNSCQLVCLSTMSSSLNFEFSTNCLYWKLYDWEQDYVNCSSTNQAKGKNRTQKRLPIFQLEAYVAYLFSLFLVKYLIFVSWQPVSLELGGKSPIVVFEDVDLNKEAVEWTMFGCFWTNGQICAATTHLIIHVV 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1381 285 PANTHER ALDEHYDE DEHYDROGENASE 234 283 - -
Acco12g1381 285 SUPERFAMILY ALDH-like 232 283 IPR016161 GO:0016491
Acco12g1381 285 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 238 245 IPR029510 GO:0016491
Acco12g1381 285 Pfam Aldehyde dehydrogenase family 234 283 IPR015590 GO:0016491
Acco12g1381 285 Pfam Aldehyde dehydrogenase family 2 150 IPR015590 GO:0016491
Acco12g1381 285 SUPERFAMILY ALDH-like 2 150 IPR016161 GO:0016491
Acco12g1381 285 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 242 283 IPR016163 GO:0016620
Acco12g1381 285 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 155 IPR016162 GO:0016491
Acco12g1381 285 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 267 278 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1381 Acco-ChrAcco12 20409144 20411026 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1381 2 283 Aldehyde Dehydrogenase Gene Family AT3G48170 52.431 2.93e-92 280